OR7E122P Olfactory Receptor
| Gene Symbol | OR7E122P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR3-1, HsOR3.1.1P, ORL3110 |
| External Ids | HGNC: 15050 GeneBank: AF399419, BK004780, NG_004265 ORDB: ORL3110 |
| Build #39 labels | OR7E122P |
| Chromosomal location | 3:8,688,234-8,689,154 (+) |
| Cluster | 3@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E111P | 92.18% | 307 |
| OR7E116P | 90.88% | 307 |
| OR7E4P | 89.9% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 72% | 291 |
| Mouse | Or7e178 | 66% | 295 |
| Rat | Or7e176 | 62% | 304 |
| Cow | OR7E191P | 69% | 295 |
| Orang | OR7E111BP | 89% | 297 |
| Orang | OR7E111P | 89% | 297 |
| Orang | OR7E116P | 90% | 290 |
| Orang | OR7E100P | 86% | 296 |
| Horse | OR7E227 | 69% | 295 |
| Chimp | OR7E111P | 92% | 297 |
Sequence information
| Nucleotide sequence |
ATGGGACTCTCAGAGGATCCAGAACTGCAGCCCGTCCTCGCTGGGCTGTCCCTGTCCATG TGTCTGGTCACGGTGCTGAGGAACCTGCTCAGCATCCTGGCTGTCAGCTCTGACTCCCAC CTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTGCTGGGCTGACATCGGTTTCACC TCGGCCACGGTTCCCAAGATAATTGTGGACATGCAGTCGCATAGCAGAGTCATCTCTTAT GTGGGCTGCCTGACACGGATGTCTTTTTTGGTCCTTTTTGCATGTATAGAAGACATGCTT CTGACTGTGATGGCCTATGACTGCTTTGTAGCCATCTGTCGCCCTCTACACTACCCAGTC ATCGTGAATCCTCACCTCCGTGTCTTCTTAGTTTTGGTGTCCTTTTTCCTTAGCCTGTTG GATTCCCAGCTGCACAGTTAGATTGTGTTACAATTCACCTTCTTCAAGAATGTGGAAATC TCTAATTTTGTCTGTGAGCCATCTCAACTTCTCAAGCTTGCCTGTTCTGACAGCATCATC AATAGCATATTCATATATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATC CTTTTGTCTTACTGTAAAATTGTTCCCTCCATTCTAAGGATTTCAACATCAGATGGGAAA TATAAAGCCTTCTCCACCTGTGGCTCTCACCTGGCACTTGTTTGCTTATTTTATGGAGCA GGCATTGGCGTGTACCTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGTG TCAGTGATGTACACTGTGGTCACCCCCATGCTGAACCCTTTCATCTACAGCCTGAGAAAC AGGGACATTCAAAGCACCCTGAGGAGGCTGCTCAGCAGAACAGTCGAATCTCATGATCTG TTCCATCCTTTTTCTTGTGTG |
| Conceptual translation |
MGLSEDPELQPVLAGLSLSMCLVTVLRNLLSILAVSSDSHLHTPMYFFLSNLCWADIGFT SATVPKIIVDMQSHSRVISYVGCLTRMSFLVLFACIEDMLLTVMAYDCFVAICRPLHYPV IVNPHLRVFLVLVSFFLSLLDSQLHSXVLQFTFFKNVEISNFVCEPSQLLKLACSDSII NSIFIYFDSTMFGFLPISGILLSYCKIVPSILRISTSDGKYKAFSTCGSHLALVCLFYGA GIGVYLTSAVSPPPRNGVVVSVMYTVVTPMLNPFIYSLRNRDIQSTLRRLLSRTVESHDL FHPFSCV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 8,730,781 | 8,730,781 | SNP | A/C | rs350814 (DbSNP) | |
| 3 | 8,730,260 | 8,730,260 | SNP | A/G | rs6770204 (DbSNP) | |
| 3 | 8,729,991 | 8,729,991 | SNP | A/G | rs13321239 (DbSNP) | |
| 3 | 8,729,981 | 8,729,981 | SNP | A/G | rs350813 (DbSNP) | |
| 3 | 8,730,717 | 8,730,717 | SNP | A/G | rs11709130 (DbSNP) | |
| 3 | 8,730,289 | 8,730,289 | SNP | C/G | rs164450 (DbSNP) | |
| 3 | 8,688,520 | 8,688,520 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 3 | 8,688,603 | 8,688,603 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 3 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 8,711,588 | 8,744,024 | CopyNumber | Variation_68331 (DGV) |
| CopyNumber | 32 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.