OR7E126P Olfactory Receptor
| Gene Symbol | OR7E126P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-1, hg500, HsOR11.15.4P, ORL3642 |
| External Ids | HGNC: 15304 GeneBank: AB065487, AF065852, AF399380 ORDB: ORL3642 |
| Build #39 labels | OR7E126P |
| Chromosomal location | 11:71,903,185-71,904,119 (+) |
| Cluster | 11@72 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E148P | 90.91% | 319 |
| OR7E59P | 89.06% | 320 |
| OR7E84P | 91.88% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 70% | 310 |
| Mouse | Or7e177 | 63% | 315 |
| Rat | Or7e173 | 62% | 311 |
| Cow | OR7E186 | 68% | 307 |
| Orang | OR7E12P | 86% | 316 |
| Orang | OR7E53P | 85% | 316 |
| Orang | OR7E84BP | 84% | 319 |
| Horse | OR7E225 | 66% | 317 |
| Chimp | OR7E53P | 87% | 320 |
| Chimp | OR7E59P | 85% | 317 |
| Chimp | OR7E36P | 85% | 317 |
| Chimp | OR7E148P | 88% | 299 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | CR748213 |
| mRNA | AK021566 |
Sequence information
| Nucleotide sequence |
AACGATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTTCTCCTCGAACTCTCA GAGGATCCAGAACTGCAGCCGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACG GTGCTGGAGAACCTGCTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACACCCCA TGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACACGGTCCC CAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTGAC TCAGATGTCTCTCTTTGCCATTTTTGGAGGCAGGGAAGAGAGACATGCTCCTGAGTGTGA TGGCCTACGACCAGTTTGTAGCCATCTGTCACCCTCCATATCGTTCAGCCATCTTGAACC CGTGTTTCTGTGGCTTCCTAGATTTGTTGTCCTTGTTTTTTTTTTCTTTTTTTTTTTTTC CCTCAGTCTTTTAGACTCTCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAA GGATGTGGAAATTCCTAATTTCTTCTGGGAACCTTCTGTGACACCTTCACCAGGAACATC AACATGTATTTCCCTGCTGCCGTATTTGGTTTTCTTCCCATCTCGGGGACCCTTTTCTCT TACTGTAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAGTATAAACCT TCACCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAACAGGCGTTGGAG GGTACCTCGGTTCAGATGTGTCATCTTCCCCGAGAAAGCGTGCAGTGGCCTCAGTGATGT ACACGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGAAACAGGGATATGA AAAGTGTCCTGCGGCGGCCGCACAGCAGCGCAGTC |
| Conceptual translation |
NDTDPQSLTDVSIFLLLELSEDPELQPVVAGLFLSMCLVTVLENLLIILAVSPDSHLH/ PMYFFLSNLSLPDIGFTS/TVPKMIVDIQSHSRVISYAGCLTQMSLFAIFGGREE\ML LSVMAYDQFVAICHPPYRSAILNPCFCGFL\CCPCFFFLFFFF\SLLDSQLHNLIALQ MTCFKDVEIPNFFWEP/CDTFTRNINMYFPAAVFGFLPISGTLFSYCKIVSSILRVSSS GGKYK/FTTCGSHLSVVCXYGTGVGGYLGSDVSSSPRKRAVASVMYTVVTPMLNPFIY SLRNRDMKSVLRRPHSSAV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 71,614,709 | 71,614,709 | Del(1) | -/T | rs66686094 (DbSNP) | |
| 11 | 71,614,261 | 71,614,270 | Del(10) | -/GTCTCTATAT | rs71467455 (DbSNP) | |
| 11 | 71,615,001 | 71,615,000 | Ins(1) | -/G | rs35969862 (DbSNP) | |
| 11 | 71,614,822 | 71,614,822 | SNP | A/T | rs73527717 (DbSNP) | |
| 11 | 71,614,696 | 71,614,696 | SNP | C/T | rs72952212 (DbSNP) | |
| 11 | 71,614,309 | 71,614,309 | SNP | C/T | rs57775901 (DbSNP) | |
| 11 | 71,614,709 | 71,614,709 | SNP | C/T | rs66686095 (DbSNP) | |
| 11 | 71,903,650 | 71,903,650 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 11 | 71,904,117 | 71,904,117 | SNP | G/A | 1000GP (CEU) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 71,363,639 | 71,657,576 | CopyNumber | Variation_3857 (DGV) |
| 11 | 71,609,606 | 71,627,327 | CopyNumber | Variation_35013 (DGV) |
| CopyNumber | 128 (Hasin) | |||
| 11 | 71,614,131 | 71,617,165 | Deletion, CopyNumber | #256 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.