OR7E59P Olfactory Receptor
| Gene Symbol | OR7E59P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST119, HsOR7.2.3P, ORL4102 |
| External Ids | HGNC: 8434 GeneBank: AF399374, NG_004398 ORDB: ORL4102 |
| Build #39 labels | OR7E137P, OR7E59P |
| Chromosomal location | 7:6,879,622-6,880,580 (-) |
| Cluster | 7@7 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E11P | 92.5% | 320 |
| OR7E12P | 90.62% | 320 |
| OR7E84P | 89.38% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 68% | 320 |
| Mouse | Or7e178 | 64% | 317 |
| Rat | Or7e173 | 63% | 313 |
| Cow | OR7E186 | 68% | 314 |
| Orang | OR7E12P | 85% | 317 |
| Orang | OR7E53P | 85% | 317 |
| Orang | OR7E14P | 84% | 320 |
| Orang | OR7E84BP | 83% | 320 |
| Horse | OR7E220 | 67% | 316 |
| Chimp | OR7E53P | 87% | 320 |
| Chimp | OR7E36P | 86% | 318 |
| Chimp | OR7E148P | 89% | 300 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | AA815433 |
Sequence information
| Nucleotide sequence |
AACTATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCAAACTCTCA GAGGATCCAGAACTGCAGCCGGTCGTTGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACA GTGCTGGGGAACCTGCTCATCATCCTGGCCATCAGCCCTGACTCCCACCTCCACATCCCC ATGTACTTCTTCCTCTCCAACCTGCCCTTGCCTGACATCGGTTTCACCTCCACCACGGTC CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCCTCTCCTATGCGGGCTGCCTG ACTCAGATGTCTCTCTTTGCCATTTTTGGAAGCATGGAAGAGAGGCATGCTCCTGAGTGT GATGGCATATGACCGGTTTGTAGCCATCTGTCACCCTCTATATCGTTCAGCCATCTTGAA CCCGTGATTCTGTGGCTTCCTAGATTTGTTGTCTTTGTTTTTGTTTGTTTGTTTGTTTGT TTTTCTCAGTCTTCTAGACTCCCACCTGCACAACTTGATTGCCTTACAAATGACCTGCTC CAAGGATGTGGAAATTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCATG TTGTGACACCTTCACCAGGAACATCAACATGTATTTCCCTGCTGCCATATTTGGTTTTCT TCCCATCTCAGGGACCTTTTCTCTTACTGTAAAATTCTTTCCTCCATTCTGAGGGTTTCA TCATCAGGTGGGAAGTATAAACCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCT GATTTTATGGAACAGGCGTTGGAGGGTACCTCGGTTCAGATGTGTCATCTTCCCCGAGAA AGAGTGCAGTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATGT ACAGCCTGAGAAACAGGGATATGAAAAGTGTCCTGCGGCGGCCGCACGGCAGCACAGTC |
| Conceptual translation |
NYTDPQSLTDVSIFLLLKLSEDPELQPVVAGLFLSMCLVTVLGNLLIILAISPDSHLHIP MYFFLSNLPLPDIGFTSTTVPKMIVDIQSHSRVLSYAGCLTQMSLFAIFGSMEE\MLLS VMAYDRFVAICHPLYRSAILNPXCGFL\CCLCFCLFVCL/FLSLLDSHLHNLIALQM TCSKDVEIPNFFWEPSQLPHLACCDTFTRNINMYFPAAIFGFLPISG/LFSYCKILSSI LRVSSSGGKYK/FSTCGSHLSVVCXYGTGVGGYLGSDVSSSPRKSAVASVMYTVVTPM LNPFMYSLRNRDMKSVLRRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI) | |
| 7 | 6,880,076 | 6,880,076 | SNP | G/C | 1000GP (CEU, CHBJPT) | |
| 7 | 6,880,118 | 6,880,118 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 7 | 6,919,565 | 6,919,565 | SNP | C/T | rs13241878 (DbSNP) | |
| 7 | 6,919,600 | 6,919,599 | Ins(1) | -/A | rs35964697 (DbSNP) | |
| 7 | 6,919,707 | 6,919,707 | SNP | C/G | rs10256981 (DbSNP) | |
| 7 | 6,919,749 | 6,919,749 | SNP | A/C | rs10228609 (DbSNP) | |
| 7 | 6,919,881 | 6,919,881 | SNP | C/T | rs10247113 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 7 | 6,687,733 | 7,773,841 | CopyNumber | Variation_8546 (DGV) |
| 7 | 6,750,772 | 6,990,043 | InversionBreakpoint | Variation_0842 (DGV) |
| 7 | 6,764,583 | 6,977,214 | CopyNumber | Variation_2673 (DGV) |
| 7 | 6,877,702 | 6,928,489 | CopyNumber | Variation_36701 (DGV) |
| 7 | 6,879,057 | 6,926,113 | CopyNumber | Variation_99856 (DGV) |
| 7 | 6,899,872 | 6,924,934 | CopyNumber | Variation_22900 (DGV) |
| 7 | 6,917,253 | 6,920,311 | Deletion | #308 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.