OR7E148P Olfactory Receptor
| Gene Symbol | OR7E148P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR12.1.2P |
| External Ids | HGNC: 19642 GeneBank: NG_004303 |
| Build #39 labels | OR7E150P, OR7E148P |
| Chromosomal location | 12:8,427,662-8,428,614 (-) |
| Cluster | 12@9 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E11P | 89.91% | 317 |
| OR7E126P | 90.91% | 319 |
| OR7E84P | 90.94% | 320 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 69% | 308 |
| Mouse | Or7e178 | 63% | 314 |
| Rat | Or7e173 | 62% | 309 |
| Cow | OR7E186 | 68% | 309 |
| Orang | OR7E12P | 86% | 314 |
| Orang | OR7E53P | 86% | 314 |
| Horse | OR7E225 | 65% | 315 |
| Chimp | OR7E53P | 88% | 320 |
| Chimp | OR7E59P | 85% | 317 |
| Chimp | OR7E36P | 85% | 316 |
Sequence information
| Nucleotide sequence |
AACGCTACAGACCCACAGAGTCCAACAGTTGTCTCTATATTCCTCCTCCTCGAACTCTCA GAGGATCCAGAACTACAGCCGGTCGTCGCTGGGCTGTTCCTGTCCATGTGCCTGGTCAGG GTGCTGGGGAACCTGCTCATCATCCTGGCCGTCAGCCCTGACTCCCACCTCCACACCCCC ATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCACCGTC CCCAAGATGATAGTGGAGATCCAGTCTCACAGCAGAGTCATCTCCTATGCAGGCTGCCTG ACTCAGATGTCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGAGACATGCTCCTGAGTGT GATGGCCTATGACCAGTTTGTAGCCATCTGCCACCCTCCATATCGTGCAGCCATCTTGAA CCCGTGTTTCTGTGGCTTCCTAGATTTGTTGTCCTTGTTTTTTTTTTTTTTTTTCCCCTC AGGCTTTTAGACTCCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGAT GTGGAAATTCCTAATTTCTTCTGGGAACCTTTTCAACTCCCCCATCTTGCATGTTGTGAC ACCTTCACCAGGAACATCAACCTGTATTTCCCTGCTGCCGTATTTGGTTTTCTTCCCATC TCGGGGAGCCTTTTCTCTTACTGTAAAATTATTTCCTCCATTCTGAGGGTTTCCTCATCA GGTGGGAAGTAGAAACCTTCGCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTT ATGGAAGAGGCGTTGGAGGGTACCTCGGTTCAGATGTGTCATCGTCCCCAAGAAAGGGTG CAGTGGCCTCAGTGATGTACACAGTGGTCACACCCATGCTGAACCCCTTCATCTACAGCC TGAGAAACAGGGATATGAAAAGTGTCCTGCGGCGGCCGCACGGCAGCACAGTC |
| Conceptual translation |
NATDPQSPTVVSIFLLLELSEDPELQPVVAGLFLSMCLVRVLGNLLIILAVSPDSHLHTP MYFFLSNLSLPDIGFTSTTVPKMIVEIQSHSRVISYAGCLTQMSLFAIFGGMEE\MLLS VMAYDQFVAICHPPYRAAILNPCFCGFL\CCP\FFFFFPLRLLDSQLHNLIALQMTCF KDVEIPNFFWEPFQLPHLACCDTFTRNINLYFPAAVFGFLPISGSLFSYCKIISSILRVS SSGGKX/FATCGSHLSVVCXYGRGVGGYLGSDVSSSPRKGAVASVMYTVVTPMLNPF IYSLRNRDMKSVLRRPHGSTV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 8,580,753 | 8,580,753 | Del(1) | -/A | rs61276801 (DbSNP) | |
| 12 | 8,580,470 | 8,580,470 | SNP | A/C | rs28509271 (DbSNP) | |
| 12 | 8,580,737 | 8,580,737 | SNP | A/G | rs28515742 (DbSNP) | |
| 12 | 8,581,035 | 8,581,035 | SNP | A/G | rs28685160 (DbSNP) | |
| 12 | 8,580,464 | 8,580,464 | SNP | A/G | rs28474819 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 12 | 8,557,265 | 8,591,871 | CopyNumber | Variation_0425 (DGV), Variation_35122 (DGV) |
| 12 | 8,280,755 | 8,580,804 | CopyNumber | Variation_2969 (DGV) |
| 12 | 7,856,819 | 8,623,987 | CopyNumber | Variation_3873 (DGV) |
| 12 | 8,555,826 | 8,591,712 | CopyNumber | Variation_22915 (DGV) |
| 12 | 8,556,966 | 8,592,561 | CopyNumber | Variation_23225 (DGV) |
| 12 | 8,550,961 | 8,603,512 | CopyNumber | Variation_35121 (DGV) |
| 12 | 8,558,488 | 8,584,672 | CopyNumber | Variation_37828 (DGV) |
| 12 | 8,575,904 | 8,596,862 | CopyNumber | Variation_61204 (DGV) |
| 12 | 8,544,884 | 8,601,829 | CopyNumber | Variation_71454 (DGV) |
| 12 | 8,323,225 | 8,589,822 | CopyNumber | Variation_71457 (DGV) |
| 12 | 8,532,974 | 8,600,304 | CopyNumber | Variation_75930 (DGV) |
| 12 | 8,535,277 | 8,600,304 | CopyNumber | Variation_86181 (DGV) |
| 12 | 8,442,317 | 8,600,304 | CopyNumber | Variation_86182 (DGV) |
| 12 | 8,563,367 | 8,600,304 | CopyNumber | Variation_86183 (DGV) |
| 12 | 8,533,001 | 8,596,370 | CopyNumber | Variation_101423 (DGV) |
| CopyNumber | 136 (Hasin) | |||
| 12 | 8,578,258 | 8,581,310 | Deletion | #2 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.