OR7E154P Olfactory Receptor
Gene Symbol | OR7E154P1 (View this gene in GeneCards) |
Family | 7 |
Subfamily | E |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | PJCG6, HsOR8.2.1P |
External Ids | HGNC: 31309 GeneBank: AF359416, AF399407, NG_004256, NG_004634, XM_496950 |
Build #39 labels | |
Chromosomal location | 8:7,705,164-7,706,132 (-) |
Cluster | 8@8a |
Synteny | CLIC#0 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR7E125P | 100% | 323 |
OR7E157P | 96.59% | 323 |
OR7E96P | 96.59% | 323 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR7E153 | 69% | 306 |
Mouse | Or7e178 | 64% | 302 |
Rat | Or7e173 | 61% | 305 |
Cow | OR7E186 | 68% | 306 |
Orang | OR7E103P | 89% | 307 |
Orang | OR7E163P | 88% | 299 |
Orang | OR7E163RP | 88% | 299 |
Orang | OR7E103BP | 87% | 301 |
Horse | OR7E225 | 69% | 305 |
Chimp | OR7E7P | 89% | 307 |
Chimp | OR7E163TP | 91% | 299 |
Chimp | OR7E161P | 88% | 309 |
Chimp | OR7E115P | 86% | 309 |
Expression evidences
Source | Accession |
---|---|
ESTs | DB305141 |
mRNA | AF359416 |
Sequence information
Nucleotide sequence |
ATGTTGGGACTAATATCTCACAGGTGTCTGAGAATTCCTCCTCCTGGGACTCTCAGAGGA TCCAGAACTGCAGCCGGCCCTCGCTTTGCTGTCCCTGTCCCTGTCCATGTATCTGGTCAC GGTGCTGAGGAACCTGTTCAGCATCCTGGCTGTCAGCTCTGACTGCCCCCTCCACACCCC CATGTACTTCTTCCTCTCCAACCTGTGCTGGCCTGACATCGGTTTCACCTCGGCCATGGT TCCCAAGATGATTGTGGACACGCAGTCGCATAGCAGAGTCATCTCTCATGCGGGCTGCCT GACACAGATGTCTTTCCTGCTCCTTGTTGCATGTATAGAAGGCATGCTCCTGACTGTGAT GGCCTATGACTGCTTTGTAGCCATCTGTCGCCCTCTGCACTACCCAGTCATCGTGAATCC TCACCTCTGTGTCTTCTTCGTTTTGGTGTCCTTTTTCCTTAGCCTGTTGGATTCCCAGCT GCACAGTTGGATTGTGTTACAATTAACCATCATCAAGAATGTGGAAATCTCTAATTTGGT CTGTGACCCCTCTCAACTTCTCAAACTTGCCTGTTCTGACAGTGTCATCAATAACATATT CATATATTTCGATAGTACTATGTTTGGTTTTCTTCCCATTTCAGGGATCTTTTTGTCTTA CTATAAAATTGTCCCCTCCATTCTAAGGATTTCATCGTCAGATGGGAAGTATAAAGCCTT CTCCACCTGTGGCTGTCATCTAGCAGTTGTTTGCTGGTTTTATGGAACAGGCATTGGCAT GTACCTGACTTCAGCTGTGTCACCACCCCCCAGGAATGGTGTGGTGGCATCAGTGATGTA CGCTGTGGTCACCCCATGCTGAACCTTTTCATCTGCAGCCTGAGAAACAGGGACATACAA AGTGCCCTGCGGAGGCTGGGCAGCAGAGCATTCGAATCTCATGATCTGTTCCATCCTTTT TCTTGTGTG |
Conceptual translation |
MLGL\LTGVXFLLLGLSEDPELQPALALLSLSLSMYLVTVLRNLFSILAVSSDCPLHT PMYFFLSNLCWPDIGFTSAMVPKMIVDTQSHSRVISHAGCLTQMSFLLLVACIEGMLLTV MAYDCFVAICRPLHYPVIVNPHLCVFFVLVSFFLSLLDSQLHSWIVLQLTIIKNVEISNL VCDPSQLLKLACSDSVINNIFIYFDSTMFGFLPISGIFLSYYKIVPSILRISSSDGKYKA FSTCGCHLAVVCWFYGTGIGMYLTSAVSPPPRNGVVASVMYAVV/PMLNLFICSLRNRD IQSALRRLGSRAFESHDLFHPFSCV Protein domains and features |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
8 | 6,884,206 | 8,174,628 | CopyNumber | Variation_0296 (DGV) |
8 | 6,925,972 | 8,065,971 | InversionBreakpoint | Variation_0348 (DGV) |
8 | 6,921,404 | 8,145,931 | CopyNumber | Variation_2732 (DGV) |
8 | 6,731,720 | 8,306,743 | CopyNumber | Variation_3719 (DGV) |
8 | 7,053,215 | 7,753,552 | CopyNumber | Variation_7702 (DGV) |
8 | 7,235,582 | 8,145,931 | CopyNumber | Variation_8593 (DGV) |
8 | 7,291,132 | 8,171,471 | CopyNumber | Variation_9081 (DGV) |
8 | 7,104,792 | 7,892,745 | CopyNumber | Variation_31424 (DGV) |
8 | 7,110,875 | 7,891,744 | CopyNumber | Variation_32996 (DGV) |
8 | 7,235,580 | 8,201,372 | CopyNumber | Variation_34519 (DGV) |
8 | 7,219,660 | 12,005,446 | Inversion | Variation_37303 (DGV) |
8 | 7,426,605 | 12,450,985 | Inversion | Variation_37304 (DGV) |
8 | 7,437,436 | 12,456,008 | Inversion | Variation_37305 (DGV) |
8 | 7,451,668 | 12,441,708 | Inversion | Variation_37306 (DGV) |
8 | 7,460,958 | 12,435,737 | Inversion | Variation_37307 (DGV) |
8 | 7,250,380 | 7,798,851 | CopyNumber | Variation_38958 (DGV) |
8 | 7,368,995 | 8,106,508 | CopyNumber | Variation_52617 (DGV) |
8 | 7,524,983 | 7,569,060 | CopyNumber | Variation_70264 (DGV) |
8 | 7,524,983 | 7,893,909 | CopyNumber | Variation_70271 (DGV) |
8 | 7,524,983 | 8,098,110 | CopyNumber | Variation_70272 (DGV) |
8 | 7,365,782 | 7,666,230 | CopyNumber | Variation_82450 (DGV), Variation_95210 (DGV) |
8 | 7,444,454 | 7,566,102 | CopyNumber | Variation_82452 (DGV) |
CopyNumber | 153 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
Accession | Type | Chr | Start | End | Strand | |
---|---|---|---|---|---|---|
LOC728731.aApr07-unspliced | main_exon | 3UTR | chr8 | 7,705,126 | 7,705,164 | - |
CDS | chr8 | 7,705,164 | 7,706,132 | - | ||
5UTR | chr8 | 7,706,132 | 7,709,696 | - |