OR7E156P Olfactory Receptor
| Gene Symbol | OR7E156P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR13.3.1P |
| External Ids | HGNC: 31311 GeneBank: AK097490, AK097573 |
| Build #39 labels | |
| Chromosomal location | 13:63,742,314-63,742,860 (+) |
| Cluster | 13@64 |
| Synteny | CLIC#0 |
| Remarks | Disrupted by STR1 repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E104P | 97.27% | 183 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E153 | 74% | 155 |
| Mouse | Or7e178 | 68% | 164 |
| Rat | Or7e177 | 66% | 155 |
| Cow | OR7E191P | 68% | 160 |
| Orang | OR7E31DP | 85% | 169 |
| Orang | OR7E14P | 84% | 160 |
| Orang | OR7E31P | 86% | 155 |
| Horse | OR7E225 | 70% | 161 |
| Chimp | OR7E101CP | 94% | 170 |
| Chimp | OR7E101BP | 94% | 161 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | DB336677 |
| mRNA | AL137719 |
| GNF Atlas2 | 222327_x_at |
Sequence information
| Nucleotide sequence |
GGCTGGCTCTCAGTTCCCGCCTTTTTTTTTTTTCTCAGTGTTTTAGACGCCCAGCTGCAC AACTTGATTGCCTTACAAATGACCTGCTTCCAGGATGCGGAAATTCCTAATTTCTTCTGT GACCCTTCTCAACTCCCCCATCTTGCATGTTGTGACACCTTCACCAATAACATAATCATG TATTTCCCTGCTGTCATATTTGGTTTTCTTCCCATCTCTGGGACCCTTTTCTCTTACTAT AAAATTGTTTCCTCCATTCTGAGTGTTTCATCATCACGTGGGCAGTATAAGGCCTTCTCC ACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTACGGAACGGGCGTTGGAGGGTAC TTCAGTTCAGATGTGTCATCTTCCCCGAGAAAGGCTGCAGTGGCCTCAGTGATGTACACG GTGATCACCCCATGCTGAACCCCTTCATCTACAGCCTGAGAAACAGGCATATTAAAAGTG TCCTGCGGCGGCCGCACAGCAGCACCGTCCAATCTCCGTATCTTCTTATCTGTTCCATTC CTTTTGT |
| Conceptual translation |
GWLSVPAFFFFLSVLDAQLHNLIALQMTCFQDAEIPNFFCDPSQLPHLACCDTFTNNIIM YFPAVIFGFLPISGTLFSYYKIVSSILSVSSSRGQYKAFSTCGSHLSVVCXYGTGVGGY FSSDVSSSPRKAAVASVMYTVI/PMLNPFIYSLRNRHIKSVLRRPHSSTVQSPYLL/L FHSFC Protein domains and features |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 13 | 64,303,507 | 64,387,507 | CopyNumber | Variation_3017 (DGV) |
| 13 | 64,263,558 | 64,331,013 | Inversion | Variation_37146 (DGV) |
| 13 | 64,260,773 | 64,343,819 | CopyNumber | Variation_49234 (DGV) |
| 13 | 64,263,419 | 64,343,819 | CopyNumber | Variation_49235 (DGV) |
| 13 | 64,310,757 | 64,343,819 | CopyNumber | Variation_49236 (DGV) |
| 13 | 64,288,650 | 64,429,513 | CopyNumber | Variation_86876 (DGV) |
| CopyNumber | 181 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E156P.aApr07 | exon_5UTR | chr13 | 63,738,158 | 63,738,349 | + | |
| exon_5UTR | chr13 | 63,738,873 | 63,739,016 | + | ||
| exon_5UTR | chr13 | 63,740,766 | 63,740,985 | + | ||
| main_exon | 5UTR | chr13 | 63,742,094 | 63,742,314 | + | |
| CDS_partial | chr13 | 63,742,314 | 63,742,499 | + | ||
| OR7E156P.bApr07 | exon_5UTR | chr13 | 63,738,158 | 63,738,349 | + | |
| exon_5UTR | chr13 | 63,738,873 | 63,740,243 | + | ||
| exon_5UTR | chr13 | 63,740,766 | 63,740,909 | + | ||
| main_exon | CDS_partial | chr13 | 63,742,352 | 63,742,568 | + | |
| OR7E156P.cApr07 | exon_5UTR | chr13 | 63,738,129 | 63,738,349 | + | |
| exon_5UTR | chr13 | 63,738,941 | 63,740,243 | + | ||
| exon_5UTR | chr13 | 63,740,766 | 63,740,909 | + | ||
| main_exon | CDS_partial | chr13 | 63,742,352 | 63,742,499 | + | |
| OR7E156P.dApr07-unspliced | main_exon | 5UTR | chr13 | 63,741,763 | 63,742,314 | + |
| CDS_partial | chr13 | 63,742,314 | 63,742,499 | + | ||
| OR7E156P.eApr07 | main_exon | CDS_partial | chr13 | 63,742,352 | 63,742,785 | + |
| OR7E156P.gApr07 | exon_5UTR | chr13 | 63,737,436 | 63,737,974 | + | |
| exon_5UTR | chr13 | 63,740,063 | 63,740,243 | + | ||
| exon_5UTR | chr13 | 63,740,766 | 63,740,909 | + | ||
| main_exon | CDS_partial | chr13 | 63,742,352 | 63,742,568 | + | |