OR7E25P Olfactory Receptor
| Gene Symbol | OR7E25P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | CIT-B-440L2, OR19-12, OR19-C, HsOR19.2.10P, ORL3781 |
| External Ids | HGNC: 8397 GeneBank: AF399401, BK004813, NG_004132 ORDB: ORL3781 |
| Build #39 labels | OR7E25P |
| Chromosomal location | 19:9,204,252-9,205,232 (+) |
| Cluster | 19@9b |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E14P | 75.23% | 323 |
| OR7E19P | 74.84% | 322 |
| OR7E24 | 79.82% | 327 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 78% | 323 |
| Mouse | Or7e178 | 75% | 303 |
| Rat | Or7e177 | 71% | 291 |
| Cow | OR7E186 | 74% | 316 |
| Orang | OR7E24P | 80% | 313 |
| Horse | OR7E225 | 75% | 330 |
| Chimp | OR7E14P | 77% | 312 |
Sequence information
| Nucleotide sequence |
TTTTGTCCTTTCCTTTTTTCCAATTCTCTTTTTCTCAATTGTGTCCAAGATACACAGAGC CAGAGAATCTCACAGGTGTCTTAGAATTCCTGCTCCTGGGACTCCCAGATGATCCAGAAC TGCAGCCCGTCCTCTTTGGGCTGTTCCTGTCCATGTACCTGGTCATGGTGCTGGGGAACC TGCTCATCATTCTGGCCGTCAGCTCTGACTCCCATCTCCACAGCCCCATGTACTTCTTCC TCTCCAACCTGTCCTTGGCTGACATCGGTTTTGCCTCTACTACTGTCCCCAAGATGATTG TGGACATCCAGGCTCATAGTAGACTCATCTCTTACGTGGGCTGCCTGACTCAGATGTCTT TTTTGATCTTTTTCGCATGTATGGAAAGTCTGCTCCTGATTGTGATGGCCTATGACCGGT TCGTGGCCATCTGTCACCCCCTGCACTACCAAGTCATCATGAGCCCACGACTCTGTGGCT TCTTAGTTTTGGTGTCTTTTTTTCTTAGCCTTTTGGACTCTCAGCTGCACAATTTGATTG TGTTACAACTTACCTGCTTCAACGATGTGGAAATCTCTAATTTTTTTCTGTGACCCTTCT TAACTTCTCAAGCTGGCCTGTTCTGACACCTCCATTAATAACATGGTTGTATATTTTATT GGTGCCATATTTGGTTTTCTCCCTCTCTTAGGGATCCTTTTCTCTTACTATAAAATTGTT TCCTCCATTCTGAGAGTTCTCTCTTCAGGTGGGAAGTATAAAGCCTTCTCCACCTGCAGC TCTCACCTGTCAGTTGTTTGCTTACTTTATGGAACAGCCCTTGGAGGGTACCTCAGTTCA GCTGTGTCCCTTTCCTCCAGGAAGGGTGCAGTGGCCTCAGTAATGTACATGGTGGTCACC CCCATGCTGAACCCCTTCATCTACAGCCTGAGAAACAGGGACATTCAAAGTGCCCTGCAG AGGCTGCACGGCAGAATAATG |
| Conceptual translation |
FCPFLFSNSLFLN/CPRYTEPENLTGVLEFLLLGLPDDPELQPVLFGLFLSMYLVMVLG NLLIILAVSSDSHLHSPMYFFLSNLSLADIGFASTTVPKMIVDIQAHSRLISYVGCLTQM SFLIFFACMESLLLIVMAYDRFVAICHPLHYQVIMSPRLCGFLVLVSFFLSLLDSQLHNL IVLQLTCFNDVEISNFF\DPSXLKLACSDTSINNMVVYFIGAIFGFLPLLGILFSYYK IVSSILRVLSSGGKYKAFSTCSSHLSVVCLLYGTALGGYLSSAVSLSSRKGAVASVMYMV VTPMLNPFIYSLRNRDIQSALQRLHGRIM Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | A/G | 1000GP (YRI) | |
| 19 | 9,205,110 | 9,205,110 | SNP | A/G | 1000GP (CHBJPT) | |
| 19 | 9,205,133 | 9,205,133 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 19 | 9,315,809 | 9,315,809 | SNP | A/G | rs56742042 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 9,295,591 | 9,317,125 | CopyNumber | Variation_50243 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.