OR7E29P Olfactory Receptor
| Gene Symbol | OR7E29P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OST032, HsOR3.5.2P, ORL3102 |
| External Ids | HGNC: 8401 GeneBank: AF399389, NG_004130 ORDB: ORL3102 |
| Build #39 labels | OR7E29P |
| Chromosomal location | 3:125,712,125-125,713,069 (+) |
| Cluster | 3@125 |
| Synteny | CLIC#0 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7E109P | 92.09% | 316 |
| OR7E31P | 91.43% | 315 |
| OR7E36P | 90.88% | 318 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7E24 | 72% | 309 |
| Mouse | Or7e178 | 69% | 304 |
| Rat | Or7e173 | 65% | 307 |
| Cow | OR7E186 | 72% | 301 |
| Orang | OR7E15P | 90% | 315 |
| Orang | OR7E14P | 88% | 315 |
| Horse | OR7E225 | 72% | 308 |
| Chimp | OR7E36P | 90% | 318 |
| Chimp | OR7E31P | 89% | 316 |
| Chimp | OR7E33P | 87% | 316 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BG205993 |
Sequence information
| Nucleotide sequence |
TGCCCAATCTCTACAGACCCACAGAATCTAACAGATGTCTCTATATTCCTCCTCCTAGAA CCTCAGAGGATCCAGAACGGCAGCTGGTCCTTGCTGGGCTGTTCCTGTCCATGTGCCTGG TCACGGTGCTGGGGAACCTGATCATCATCCTGGACGTCAGCCCTGACTCCCACCTCCCCA CCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCA CGGTCCCCAAGATGATTGTGGACATCCAATCTCACGGCAGAGTCATCTTCTATGCAGGCT GCCTGACTCAGATGTCTCTCTTTGCCATTTTTGGAGGCATGGAAGAGAGACACGCTCCTG AGTGTGATGGCCTATGACCGGTTTGTAGCCATCTGTCACCCTCTATGTCATTCAGCCAGC ATGAACCCGTGTTTCTGTGGCTTTCTAGTTTTGTTGTCTTTTTTTTTTCTCAGTCTTTTA GACACCCAGCTGCACAACTTGATTGCCTTACAAATGACCTGCTTCAAGGATGTGGAAATT CTTAATTTCTTCTGTGACCCTTCTCAACTCCCCCATCTTGCATGTTGTGACACCTTCACC AATAACATAATCATGTATTTCCCTGCTGCCATATTTGGTTTTCTTCAGATCTCGGGGACC CTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAC TATAAAGCCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCTGATTTTATGGAACA GGCGTTGGAGGGTACCTCAGTTCAGATGTGTCATCTTCCCCGAGAAAGGGTGCAGTGGCC TCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGAAAC GGGGATATTAAAAGTGTTCTGCGGCGGCCGCAAGGCAGCAAGGTC |
| Conceptual translation |
CPISTDPQNLTDVSIFLLLE/SEDPERQLVLAGLFLSMCLVTVLGNLIIILDVSPDSHL PTPMYFFLSNLSLPDIGFTSTTVPKMIVDIQSHGRVIFYAGCLTQMSLFAIFGGMEE\T LLSVMAYDRFVAICHPLCHSASMNPCFCGFLVLLSFFFLSLLDTQLHNLIALQMTCFKDV EILNFFCDPSQLPHLACCDTFTNNIIMYFPAAIFGFLQISGTLFSYYKIVSSILRVSSSG GNYKAFSTCGSHLSVVCXYGTGVGGYLSSDVSSSPRKGAVASVMYTVVTPMLNPFIYSL RNGDIKSVLRRPQGSKV Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 3 | 125,418,471 | 125,418,471 | large insertion | 21926bp insertion | rs72495111 (DbSNP) | |
| 3 | 125,431,505 | 125,431,505 | SNP | A/C | rs1054439 (DbSNP) | |
| 3 | 125,431,752 | 125,431,752 | SNP | A/G | rs1054457 (DbSNP) | |
| 3 | 125,431,767 | 125,431,767 | SNP | A/G | rs16834477 (DbSNP) | |
| 3 | 125,431,244 | 125,431,244 | SNP | A/G | rs2976761 (DbSNP) | |
| 3 | 125,430,974 | 125,430,974 | SNP | A/T | rs72491237 (DbSNP) | |
| 3 | 125,431,673 | 125,431,673 | SNP | A/T | rs2976762 (DbSNP) | |
| 3 | 125,431,790 | 125,431,790 | SNP | C/G | rs17838817 (DbSNP) | |
| 3 | 125,431,747 | 125,431,747 | SNP | C/G | rs1054455 (DbSNP) | |
| 3 | 125,431,541 | 125,431,541 | SNP | C/T | rs62271873 (DbSNP) | |
| 3 | 125,431,751 | 125,431,751 | SNP | C/T | rs1054456 (DbSNP) | |
| 3 | 125,431,510 | 125,431,510 | SNP | C/T | rs2947714 (DbSNP) | |
| 3 | 125,431,886 | 125,431,886 | SNP | C/T | rs2976763 (DbSNP) | |
| 3 | 125,431,396 | 125,431,396 | SNP | C/T | rs9754922 (DbSNP) | |
| 3 | 125,431,305 | 125,431,305 | SNP | G/T | rs72485367 (DbSNP) | |
| 3 | 125,712,552 | 125,712,552 | SNP | C/T | 1000GP (CEU, CHBJPT) | |
| 3 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 3 | 125,399,139 | 125,465,506 | CopyNumber | Variation_68444 (DGV) |
| 3 | 125,416,714 | 125,645,185 | CopyNumber | Variation_91514 (DGV) |
| 3 | 125,416,714 | 125,474,884 | CopyNumber | Variation_91515 (DGV) |
| CopyNumber | 66 (Hasin) | |||
| 3 | 125,430,869 | 125,433,913 | Deletion | #283 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR7E29P.aApr07 | exon_5UTR | chr3 | 125,604,654 | 125,604,854 | + | |
| exon_5UTR | chr3 | 125,605,874 | 125,605,984 | + | ||
| main_exon | CDS_partial | chr3 | 125,712,183 | 125,712,565 | + | |