Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

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OR7E59P Olfactory Receptor

Gene Symbol OR7E59P1 (View this gene in GeneCards)
Family 7
Subfamily E
Pseudogene Yes
CORP pseudogene probability score
Aliases OST119, HsOR7.2.3P, ORL4102
External Ids HGNC: 8434   GeneBank: AF399374, NG_004398   ORDB: ORL4102   
Build #39 labels OR7E137P, OR7E59P
Chromosomal location 7:6,879,622-6,880,580 (-)
Cluster 7@7
Synteny CLIC#0
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR7E11P 92.5% 320
OR7E12P 90.62% 320
OR7E84P 89.38% 320

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR7E24 68% 320
Mouse Or7e178 64% 317
Rat Or7e173 63% 313
Cow OR7E186 68% 314
Orang OR7E12P 85% 317
Orang OR7E53P 85% 317
Orang OR7E14P 84% 320
Orang OR7E84BP 83% 320
Horse OR7E220 67% 316
Chimp OR7E53P 87% 320
Chimp OR7E36P 86% 318
Chimp OR7E148P 89% 300

Expression evidences

Source Accession
ESTs AA815433

Sequence information

Nucleotide sequence AACTATACAGACCCACAGAGTCTAACAGATGTCTCTATATTCCTCCTCCTCAAACTCTCA
GAGGATCCAGAACTGCAGCCGGTCGTTGCTGGGCTGTTCCTGTCCATGTGCCTGGTCACA
GTGCTGGGGAACCTGCTCATCATCCTGGCCATCAGCCCTGACTCCCACCTCCACATCCCC
ATGTACTTCTTCCTCTCCAACCTGCCCTTGCCTGACATCGGTTTCACCTCCACCACGGTC
CCCAAGATGATTGTGGACATCCAGTCTCACAGCAGAGTCCTCTCCTATGCGGGCTGCCTG
ACTCAGATGTCTCTCTTTGCCATTTTTGGAAGCATGGAAGAGAGGCATGCTCCTGAGTGT
GATGGCATATGACCGGTTTGTAGCCATCTGTCACCCTCTATATCGTTCAGCCATCTTGAA
CCCGTGATTCTGTGGCTTCCTAGATTTGTTGTCTTTGTTTTTGTTTGTTTGTTTGTTTGT
TTTTCTCAGTCTTCTAGACTCCCACCTGCACAACTTGATTGCCTTACAAATGACCTGCTC
CAAGGATGTGGAAATTCCTAATTTCTTCTGGGAACCTTCTCAACTCCCCCATCTTGCATG
TTGTGACACCTTCACCAGGAACATCAACATGTATTTCCCTGCTGCCATATTTGGTTTTCT
TCCCATCTCAGGGACCTTTTCTCTTACTGTAAAATTCTTTCCTCCATTCTGAGGGTTTCA
TCATCAGGTGGGAAGTATAAACCTTCTCCACCTGTGGGTCTCACCTGTCAGTTGTTTGCT
GATTTTATGGAACAGGCGTTGGAGGGTACCTCGGTTCAGATGTGTCATCTTCCCCGAGAA
AGAGTGCAGTGGCCTCAGTGATGTACACGGTGGTCACCCCCATGCTGAACCCCTTCATGT
ACAGCCTGAGAAACAGGGATATGAAAAGTGTCCTGCGGCGGCCGCACGGCAGCACAGTC
Conceptual translation NYTDPQSLTDVSIFLLLKLSEDPELQPVVAGLFLSMCLVTVLGNLLIILAISPDSHLHIP
MYFFLSNLPLPDIGFTSTTVPKMIVDIQSHSRVLSYAGCLTQMSLFAIFGSMEE\MLLS
VMAYDRFVAICHPLYRSAILNPXCGFL\CCLCFCLFVCL/FLSLLDSHLHNLIALQM
TCSKDVEIPNFFWEPSQLPHLACCDTFTRNINMYFPAAIFGFLPISG/LFSYCKILSSI
LRVSSSGGKYK/FSTCGSHLSVVCXYGTGVGGYLGSDVSSSPRKSAVASVMYTVVTPM
LNPFMYSLRNRDMKSVLRRPHGSTV

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
7 100 -100 SNP C/A 1000GP (YRI, YRI)
7 6,880,076 6,880,076 SNP G/C 1000GP (CEU, CHBJPT)
7 6,880,118 6,880,118 SNP C/A 1000GP (CEU, CHBJPT)
7 6,919,565 6,919,565 SNP C/T rs13241878 (DbSNP)
7 6,919,600 6,919,599 Ins(1) -/A rs35964697 (DbSNP)
7 6,919,707 6,919,707 SNP C/G rs10256981 (DbSNP)
7 6,919,749 6,919,749 SNP A/C rs10228609 (DbSNP)
7 6,919,881 6,919,881 SNP C/T rs10247113 (DbSNP)

Variations - CNVs

Chr Start End Type Sources
7 6,687,733 7,773,841 CopyNumber Variation_8546 (DGV)
7 6,750,772 6,990,043 InversionBreakpoint Variation_0842 (DGV)
7 6,764,583 6,977,214 CopyNumber Variation_2673 (DGV)
7 6,877,702 6,928,489 CopyNumber Variation_36701 (DGV)
7 6,879,057 6,926,113 CopyNumber Variation_99856 (DGV)
7 6,899,872 6,924,934 CopyNumber Variation_22900 (DGV)
7 6,917,253 6,920,311 Deletion #308 (Waszak)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.