OR7H1P Olfactory Receptor
| Gene Symbol | OR7H1P1 (View this gene in GeneCards) |
| Family | 7 |
| Subfamily | H |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | CIT-B-440L2, OR19-15, HsOR19.2.17P, ORL3790 |
| External Ids | HGNC: 8468 GeneBank: AF399427, BK004758, NG_002205 ORDB: ORL3790 |
| Build #39 labels | OR7H1P |
| Chromosomal location | 19:9,278,433-9,279,369 (-) |
| Cluster | 19@9b |
| Synteny | CLIC#42 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR7A5 | 65.45% | 301 |
| OR7C1 | 64.52% | 310 |
| OR7D4 | 66.45% | 307 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR7H5P | 78% | 314 |
| Mouse | Or7h8 | 72% | 309 |
| Rat | Or7h7b | 73% | 309 |
| Cow | OR7H5P | 76% | 312 |
| Orang | OR7H1 | 91% | 312 |
| Horse | OR7H9 | 77% | 312 |
| Chimp | OR7H1 | 96% | 312 |
Sequence information
| Nucleotide sequence |
ATGGACTTGGGAAATCAAACAAGAGTTTCAGAATTTTTACTCCTGGGATTTTCCCAAGAC CTAGAGGATCAACAGTTGCTCTTTGCACTGTTTCTGTCCATGTACCTGGTCACCGTTCTG GGGAACCTGCTCATCATCCTGGCCATCAGCTCTGACTCCCACCTCCACACCCCCAGGTAC TTCTTCCTCTCCAATCTGTCCCTGGCTGACATCGGTTTCACCTCCACCGCAGTCCCCAAG ATGCTGGTGAACATCCAGGTGCAGAGCAATGCCATCAGCTATGCAGACTGCATCGCCCAG ATGTATGTTTTTCATGGTTTTTGGAGGCATGGACACATTTCTCCTCACCGTGATGGCCTA TGACCGGTATGTGGCCATCTGTCACCCCCTGTACTACTGTGTCACCAGGAACCCCTGCCT CTGTGGCCTGCTGGTTCTTGTGTCCTGGTTCCTCAGCTTGTCATACTCCCTGATCCAGAG TCTGTTGGTGCTGCGGGTGTCCTTCTGCACCAGTTGAGTCATTCAGCACTTTTACTGTGA GCTTGCTCAGGTCCTCAGGCTTACCTGCTCAGACACACATGTCAATTACATCCTGCTCTA CGTGGTGGCCGGCCTTCTGGACTTTGTGCCCTTCTCAGGGATCCTTTTCTCCTACACCCA AATTGTCTCCTACATCCTGAGAATCTCATCCACAGATGGGAAACACAAAGCCTTTTCTAC CTGTGGATCTCATCTGTTTGTGGTTTCTTTATTCTATGGGACAGGCCTTGGTGTGTATCT TAGTTCCAATGCATCGTCCTCTTCCTGGTGGGGCATGGTGGCCTCGGTCATGTACACTGT GGTCACCCCCATGCTGAACCCCTTCATCTATTGCTTGCGGAACAGGGACATCAAGAGGAC CCTAGAAACACTGCTTGGGAGAATGCTGTATGCTCAA |
| Conceptual translation |
MDLGNQTRVSEFLLLGFSQDLEDQQLLFALFLSMYLVTVLGNLLIILAISSDSHLHTPRY FFLSNLSLADIGFTSTAVPKMLVNIQVQSNAISYADCIAQMY\FMVFGGMDTFLLTVMA YDRYVAICHPLYYCVTRNPCLCGLLVLVSWFLSLSYSLIQSLLVLRVSFCTSXIQHFYC ELAQVLRLTCSDTHVNYILLYVVAGLLDFVPFSGILFSYTQIVSYILRISSTDGKHKAFS TCGSHLFVVSLFYGTGLGVYLSSNASSSSWWGMVASVMYTVVTPMLNPFIYCLRNRDIKR TLETLLGRMLYAQ Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 19 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI) | |
| 19 | 9,279,005 | 9,279,005 | SNP | G/A | 1000GP (CEU) | |
| 19 | 9,279,027 | 9,279,027 | SNP | G/A | 1000GP (CEU) | |
| 19 | 9,389,182 | 9,389,181 | Ins(1) | -/A | rs34361886 (DbSNP) | |
| 19 | 9,389,231 | 9,389,231 | SNP | A/T | rs61742060 (DbSNP) | |
| 19 | 9,389,284 | 9,389,284 | SNP | G/A | rs61741070 (DbSNP) | |
| 19 | 9,389,818 | 9,389,818 | SNP | G/A | rs61733894 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 19 | 9,387,109 | 9,390,145 | CopyNumber | #100 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.