OR8B7P Olfactory Receptor
| Gene Symbol | OR8B7P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-304, AC002556-F, OR11-291, HsOR11.18.28P, ORL3599 |
| External Ids | HGNC: 8476 GeneBank: BK004539, BK004712, NG_002202 ORDB: ORL3599 |
| Build #39 labels | OR8B7P, OR8B13P |
| Chromosomal location | 11:124,324,843-124,325,787 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8B1P | 66.45% | 313 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8B1K | 66% | 314 |
| Mouse | Or8b1 | 66% | 313 |
| Rat | Or8b1f | 65% | 313 |
| Cow | OR8B1 | 66% | 314 |
| Orang | OR8B1P | 68% | 315 |
| Horse | OR8B1ACP | 66% | 314 |
| Chimp | OR8B1P | 67% | 314 |
Sequence information
| Nucleotide sequence |
ATGGCTCCTGGAAATATTTCTACTGTGGCTGAATTAATTCTGGTGGGGTTAAAAGACCAG ACAGATCTCCAACCGCCCCTGTTCTTCCTGTTTCTAGTAATGGGTGTGGTTGCTGGGTAG GGGAATTTGGGCTTGGTAACTCTGATTGTGTTCAGTTCATACTTTCATGCACCCATGTAC TTTTTTCTTTTTAGTTTAGCTTTTATAGACCACTTTTATTCTTCTGTGTTTATTCCAAAA ATGCTGATGAACTTCATAACAGAGAAGAATATTATTTCCTATGCGGGTTGCATGTCAGCT TTTTTTTCTTTCTTTTTTTTTTTTTTTGTTATTTCTGAATGCTATGTTTTGACGTCAATG GTCTCTGATCACTAGTGGCCATGGCCATCTGTAACCCGCTTCTGTATAACATTGCCATGT CCCCTAAAGTGTGTTCCAGCCATATGCTTGGTTCCTACTTCTGGCCCTTTTCTGGGGCCA TGGCCCATACCAGGTGCATGCTGAAACTGACCTCCTGTGAGGCAAACACCATCAACCACT ACTTCTGTGACACCCTTCATCTGCTCCAGCTCTCTTGCACCAGCACCTACGTCAGTGAGT TGATGGTTTTCATTGCAGCAGGCATCATTTTCACTGTGCCCAGTATCACCATCTTTATCT CTTATTTTTTTACCTCTCCATTATCCTATCAGCTTCACTGAGGGCTGGTCAAAATTTTTC AGCACCTGCAGTTTCCACAAAATTGCCATTTCTCTGTTCTTTGGATTAGGTGCATCATTG TGTCTTAAATTATCCTCAACTGGGACTATAAATGAAGGTAAAATATCTTCTGTCTTTCAC ATTGATGTAGTTCCCATGATAAACTCCTCAATTTACAGCTTAAGAAACAATGATGTTAAA CTTGCCTGGAGAAAAATCCTAAGTTGGAGAAAATTTCCATTTGAA |
| Conceptual translation |
MAPGNISTVAELILVGLKDQTDLQPPLFFLFLVMGVVAGXNLGLVTLIVFSSYFHAPMY FFLFSLAFIDHFYSSVFIPKMLMNFITEKNIISYAGCMSAFFSFFFFFFVISECYVLTSM VSDH/VAMAICNPLLYNIAMSPKVCSSHMLGSYFWPFSGAMAHTRCMLKLTSCEANTIN HYFCDTLHLLQLSCTSTYVSELMVFIAAGIIFTVPSITIFISYFFTSPLSY\FTEGWSK FFSTCSFHKIAISLFFGLGASLCLKLSSTGTINEGKISSVFHIDVVPMINSSIYSLRNND VKLAWRKILSWRKFPFE Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | G/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) | |
| 11 | 124,194,832 | 124,194,831 | Ins(1) | -/T | rs35377212 (DbSNP) | |
| 11 | 124,195,082 | 124,195,082 | SNP | C/G | rs658888 (DbSNP) | |
| 11 | 124,195,169 | 124,195,168 | Ins(1) | -/G | rs34737389 (DbSNP) | |
| 11 | 124,195,355 | 124,195,355 | SNP | A/C | rs2724668 (DbSNP) | |
| 11 | 124,195,372 | 124,195,374 | In-Del(3) | -/TTC | rs60993241 (DbSNP) | |
| 11 | 124,195,399 | 124,195,399 | SNP | C/T | rs61462216 (DbSNP) | |
| 11 | 124,195,424 | 124,195,424 | SNP | G/T | rs11824943 (DbSNP) | |
| 11 | 124,195,505 | 124,195,505 | SNP | C/T | rs11219592 (DbSNP) | |
| 11 | 124,195,524 | 124,195,524 | SNP | G/A | rs553995 (DbSNP) | |
| 11 | 124,195,577 | 124,195,577 | SNP | A/C | rs73608717 (DbSNP) | |
| 11 | 124,325,476 | 124,325,476 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 124,325,528 | 124,325,528 | SNP | G/T | 1000GP (CHBJPT) | |
| 11 | 124,325,609 | 124,325,609 | SNP | T/C | 1000GP (CHBJPT) | |
| 11 | 124,325,628 | 124,325,628 | SNP | A/G | 1000GP (CEU, CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 188 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.