OR8B9P Olfactory Receptor
Gene Symbol | OR8B9P1 (View this gene in GeneCards) |
Family | 8 |
Subfamily | B |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | OR11-313, HsOR11.18.38P, ORL3531 |
External Ids | HGNC: 14746 GeneBank: AF179764, AF179765, BK004640, NG_002322 ORDB: ORL3531 |
Build #39 labels | OR8B9P |
Chromosomal location | 11:124,481,000-124,481,928 (-) |
Cluster | 11@124 |
Synteny | CLIC#29 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR8B10P | 83.06% | 307 |
OR8B12 | 80.06% | 311 |
OR8B8 | 76.24% | 303 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR8B9 | 87% | 311 |
Dog | OR8B9B | 84% | 283 |
Mouse | Or8b9 | 84% | 308 |
Rat | Or8b9 | 83% | 308 |
Cow | OR8B9 | 86% | 311 |
Cow | OR8B9C | 83% | 311 |
Orang | OR8B10 | 84% | 307 |
Horse | OR8B9 | 86% | 311 |
Chimp | OR8B10P | 81% | 307 |
Sequence information
Nucleotide sequence |
ATGCCTGCCAAGAACTCCTCCTCCGTGACAGCGTTTATCCTCTCAGGCTTAACCGACCAG CCGGGACTCCAGATCCCCGCCTTCTTCCTGTTTCTAGGTTTCTACGCGGTCACGGTGGTG GGGAACCTGGGCTTGATAATCCTGATAGGGCTCAACTCTCGCCTGCATATCCCCATGTAC TTTTTCCCCTTCAACTTGTCCTTCATAGATTTTAGTTATTCCACTACCCTCGCCCCTAAA ATGCTGATGAGCTTTGTCTCAGAGAACATCATTTCCTATGCAGGGTGTATGACTCAGCTT TTTTTCTTCTGTTTCTTTGTCTTTTCTGAATCCTATATTCTATCAGCGATGGCGTATGAC CGCTACGTGGGCATCTGTAACCCACTGTTGTACACGGTCACCATGTCTCCCCAGATGTGT TTGCTCCTTTTACTGGGTGTCTATGGGATGGGGATTTTGGGGCTGTGGCTCATATGGGAA ACATAATGTTTATGTCCTTTTGTGGAGACAACCTTGTCAATCACTATATGTGTGACATCC TTCCTCTCCTTGAGCTCTCCTGCAACAGCTCTTACATAAATTTGCTGGTGGTTTTTATTA TTGTGACCGTTGGCATTGGGGTGCCGATTGTCACCATTTTTCTCTCTTATGGTTTTATTC TTTCCAGCATTCTCCACATTAGTTCCACAGAGGGCAGGTCTAAAGCCTTCAGTACCTGCA GTTCCCACATAATTGTGGTATCGCTTTTCTTTGGGTCAGGTGCTTTCATGTACCTCAAAC CACCTTCTATTCTACCCCTGGACCAGGGGAAAGTGTCCTCCATTTTTTGTACTGCTGTGG TGCCCATGTTTAACCCATTAATCTACAGCCTGAGGAATAAAGATGTCAAAGTTGCCCTGA GGAGAACCTTTTGCAGAAAATTAGTCTCT |
Conceptual translation |
MPAKNSSSVTAFILSGLTDQPGLQIPAFFLFLGFYAVTVVGNLGLIILIGLNSRLHIPMY FFPFNLSFIDFSYSTTLAPKMLMSFVSENIISYAGCMTQLFFFCFFVFSESYILSAMAYD RYVGICNPLLYTVTMSPQMCLLLLLGVYGMGIL/AVAHMGNIMFMSFCGDNLVNHYMCD ILPLLELSCNSSYINLLVVFIIVTVGIGVPIVTIFLSYGFILSSILHISSTEGRSKAFST CSSHIIVVSLFFGSGAFMYLKPPSILPLDQGKVSSIFCTAVVPMFNPLIYSLRNKDVKVA LRRTFCRKLVS Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 124,351,079 | 124,351,079 | Del(1) | -/A | rs72512176 (DbSNP) | |
11 | 124,351,080 | 124,351,080 | Del(1) | -/A | rs11361196 (DbSNP) | |
11 | 124,351,077 | 124,351,077 | Del(1) | -/A | rs35849638 (DbSNP) | |
11 | 124,351,747 | 124,351,746 | Ins(1) | -/G | rs35237847 (DbSNP) | |
11 | 124,351,409 | 124,351,409 | SNP | A/T | rs4492834 (DbSNP) | |
11 | 124,351,344 | 124,351,344 | SNP | C/T | rs7941255 (DbSNP) | |
11 | 124,481,448 | 124,481,448 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
11 | 124,481,513 | 124,481,513 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
11 | 124,481,200 | 124,481,200 | SNP | T/C | 1000GP (CHBJPT) | |
11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.