OR8I4P Olfactory Receptor
| Gene Symbol | OR8I4P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | I |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | |
| External Ids | HGNC: 31316 GeneBank: NG_004635 |
| Build #39 labels | |
| Chromosomal location | 11:56,097,244-56,097,384 (-) |
| Cluster | 11@56 |
| Synteny | CLIC#26 |
| Remarks | Disrupted by LTR repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8I2 | 95.65% | 46 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Sequence information
| Nucleotide sequence |
tctttgatgacccaggcacaggtggcatctgtattctatacgattgtcattcccatgctg aatccactcatctacagtctgaggaacaaagatgtgaaaaatgctcttctgagagtcata catagaaaactttttccatga |
| Conceptual translation |
SLMTQAQVASVFYTIVIPMLNPLIYSLRNKDVKNALLRVIHRKLFP Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | SNP | A/C | 1000GP (YRI) | |
| 11 | 55,864,786 | 55,864,786 | SNP | C/G | rs61887119 (DbSNP) | |
| 11 | 55,864,820 | 55,864,820 | SNP | A/G | rs61887120 (DbSNP) | |
| 11 | 55,864,843 | 55,864,843 | SNP | T/C | rs2512780 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 54,835,623 | 55,879,426 | CopyNumber | Variation_8690 (DGV) |
| 11 | 55,862,720 | 55,864,960 | CopyNumber | #67 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.