OR8T1P Olfactory Receptor
| Gene Symbol | OR8T1P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | T |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR12.3.5P |
| External Ids | HGNC: 19630 GeneBank: NG_004301 |
| Build #39 labels | OR8T1P |
| Chromosomal location | 12:48,442,033-48,442,947 (-) |
| Cluster | 12@49b |
| Synteny | CLIC#30 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8S1 | 69.54% | 302 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BF841342 |
Sequence information
| Nucleotide sequence |
ATGAGAAACCGCAGTGTTGTCCCTGAGTTTGTCCTCCTCGGGCTGTCAGCTGGCCCCCAG ACCCAGACTCTGCTCTTTGTGCTGTTCGTGGTGATTTGCCTCCTGACTGTGATGGGAAAC CTGCTGCTGCTGGTGGTGATTAATGCTGATTCTTGCCTCCACACACCCATGTACTTCTTC CTGGGACAATTGTCCTTCTTGGATCTCTGCCATTCCTCTGTCACTGCACCTAAGCTGTTG GAGAACCTCCTGTCTGAGAAGAAAACCATCTCAGTAGAGGGCTGCATGGCTTAGGTCTTC TTTGTGTTTGCCACTGGGGGCACTGAATCCTCCCTGCTTGCTGTGATGGCCTATGACCGC TATGTTGCCATCAGCTCTCCTTTGCTCTATGGCCAAGTGATGAACAGACAGCTGTGTTCA GGGCTGGTGGGGGGCTCATGGGGCTTGGCTTTTCTGGATGCCCTCATCAATATCCTTGTA GCTCTCAATTTAGACTTCTGTGAGGCTCAAAATATCCACCACTTCAGCTGTGAGCTGCCC TCTCTCTATCCTTTGTCTTGCTCTGATGTGTCAGCAAGTTTTACCACCCTGCTCTGCTCC AGCTTCCTGCATTTCTTTGGAAATTTTCTCATGATATTCTTGTCTTATATTTGCATTTTG TCCACCATCCTGAGGATCAGCTCCACTACAGGCAGAAGCAAAGCCTTCTCCACCTGCTCC TCCCACCTCACTGCAGTGATTTTCTTTTATGGCTCCGGATTACTCCGCTATCTCATGCCA AATTCAGGATCCATTCAAGAGCTGATCTTCTCCTTGCAGTACAGCGTGATCACTCCCATG CTGAATCTCCTCATTTACAGCCTGAAGAACAGGGAGGTGAAGGCAGCTGTGAGAAGAACA TTGAGAAAATATTTC |
| Conceptual translation |
MRNRSVVPEFVLLGLSAGPQTQTLLFVLFVVICLLTVMGNLLLLVVINADSCLHTPMYFF LGQLSFLDLCHSSVTAPKLLENLLSEKKTISVEGCMAXFFVFATGGTESSLLAVMAYDR YVAISSPLLYGQVMNRQLCSGLVGGSWGLAFLDALINILVALNLDFCEAQNIHHFSCELP SLYPLSCSDVSASFTTLLCSSFLHFFGNFLMIFLSYICILSTILRISSTTGRSKAFSTCS SHLTAVIFFYGSGLLRYLMPNSGSIQELIFSLQYSVITPMLNLLIYSLKNREVKAAVRRT LRKYF Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 12 | 100 | -100 | SNP | C/G | 1000GP (YRI, YRI) | |
| 12 | 48,442,052 | 48,442,052 | SNP | C/G | 1000GP (CEU, CHBJPT) | |
| 12 | 48,835,835 | 48,835,835 | SNP | C/G | rs17123011 (DbSNP) | |
| 12 | 48,836,287 | 48,836,287 | SNP | A/G | rs11168571 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| CopyNumber | 239 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.