OR2AQ1P Olfactory Receptor
Gene Symbol | OR2AQ1P1 (View this gene in GeneCards) |
Family | 2 |
Subfamily | AQ |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | ORL3066 |
External Ids | HGNC: 15003 GeneBank: NG_004276 ORDB: ORL3066 |
Build #39 labels | OR2AQ1P |
Chromosomal location | 1:158,795,997-158,796,237 (+) |
Cluster | 1@159a |
Synteny | CLIC#4 |
Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR2Y1 | 50.85% | 59 |
OR5I1 | 49.23% | 65 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|
Sequence information
Nucleotide sequence |
CATGGAAAAAAAGTAAAAGTGTGGTCACCATGTTCTAAGGGCCCGCCATGATCACGTACT TGAGGTCTGACTCCTAGTATAACCTACAGTGGGAAAACAGTTGGTGCTGTTCTACAGCAT TGTCTCTGCCTTCATAAAACCCATCATCTCCAGCCTCAGGAACAAGGATGTAAAAGGGGC TTCTTGGAAAGTACTTAGAGTCAAAGGGACAGCTCAAGGACCTAGTATGCTTCAGAGTTT T |
Conceptual translation |
SVVTMFXPAMITYLRSD/LVXTVGKQLVLFYSIVSAFIKPIISSLRNKDVKGASWKV LRVK/DSSRTXAS Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
1 | 100 | -100 | SNP | C/T | 1000GP (YRI) | |
1 | 158,765,934 | 158,765,934 | SNP | C/T | rs7528690 (DbSNP) | |
1 | 158,796,052 | 158,796,052 | SNP | G/A | 1000GP (CEU) | |
1 | 158,796,144 | 158,796,144 | SNP | C/T | 1000GP (CEU) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
CopyNumber | 61 (Hasin) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.