OR2P1P Olfactory Receptor
| Gene Symbol | OR2P1P1 (View this gene in GeneCards) |
| Family | 2 |
| Subfamily | P |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | hs6M1-26, AL035402-A, dJ88J8.2, HsOR6.3.3P, ORL3150 |
| External Ids | HGNC: 8272 GeneBank: NG_004693 ORDB: ORL3150 |
| Build #39 labels | OR2P1P |
| Chromosomal location | 6:29,071,832-29,072,566 (-) |
| Cluster | 6@29 |
| Synteny | CLIC#12 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR2B11 | 49.15% | 234 |
| OR2B2 | 47.98% | 198 |
| OR2C1 | 47.01% | 234 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR2B11 | 51% | 232 |
| Mouse | Or2b11 | 52% | 232 |
| Rat | Or2b11 | 51% | 232 |
| Cow | OR2P2 | 72% | 208 |
| Orang | OR2G6 | 50% | 200 |
| Horse | OR2P2 | 59% | 300 |
| Chimp | OR2B11 | 49% | 235 |
Sequence information
| Nucleotide sequence |
TTCATTCTCTGGGGTTTCTTTGACCACCCCTAGCCGGAAATGTTTCTCTTCATAATGGGG CTTGTTGCTTATCTCTGCATACTGGTGGACAACATCTCAATTATTGTGGTACCCAGGGGA TATTTTAGGGGAGCACCAAATGCATCATTTTAGCTGTGACGTCTTTGGATCCTTACATTG CCATCTGCAAACACTTGAGGTACCCAGCTATCATGCATCAGCAACTCTGTGTCCTCCTAG TGGCCATGGCATGGCTAAGCAGTTTGGCCAACTCTACTTCAGTCATCCCTTGCCGTCCAG CTGCCACTAGGCGGTAACAAGGTGGACGACTTTCTGTGTGAGGTCTCAGCGATGATCAAG ATATCACGTTTTGACACCACATTCAATGTATCTATGCTCTCCATTGTGAGGATATTTTAG TCCCTCGTTCTCTAATCAATTATCTTTGCTTACTGTGGATTCATTGTAGCTACTGTGCTG AGGATTCAGTCCTCAGGGGGAAAGAAGGAGGTCTTCAACACATGTGGTTCTCATATTGTA TCTCTCCTCTATGGGCCTGTAATTAGCATGTATGTACAGCCCTCTGCCAACTCCCAGGAC AAAAACAAATTCATGTCCCTGTTCTACAGTTTGGTGACTCCTATGCTTAACCCTTTTATC TACACTTTGAGCAACAGGGACATAAAAGGGGCAATGAGGAGGCTTCTTGTCTTTTTGTAT CACCAGGAAGAGAAC |
| Conceptual translation |
FILWGFFDHPXEMFLFIMGLV/LSLHTGGQHLNYCGTQGIFXSTKCIILAVTSLDPY IAICKHLRYPAIMHQQLCVLLVAMAWLSSLANS\QSSLAVQLPLGGNKVDDFLCEVSAM IKISRFDTTFNVSMLSIVRIFXLVLXIIFAYCGFIVATVLRIQSSGGKKEVFNTCGSH IVSLLYGPVISMYVQPSANSQDKNKFMSLFYSLVTPMLNPFIYTLSNRDIKGAMRRLLVF LYHQEEN Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 6 | 29,040,159 | 29,040,159 | SNP | A/G | rs72863513 (DbSNP) | |
| 6 | 29,039,977 | 29,039,977 | SNP | A/G | rs3131083 (DbSNP) | |
| 6 | 29,039,895 | 29,039,895 | SNP | A/G | rs6456895 (DbSNP) | |
| 6 | 29,040,269 | 29,040,269 | SNP | C/G | rs12374614 (DbSNP) | |
| 6 | 29,039,779 | 29,039,779 | SNP | G/T | rs62407619 (DbSNP) | |
| 6 | 29,072,002 | 29,072,002 | SNP | T/G | 1000GP (CEU, CHBJPT) | |
| 6 | 29,072,118 | 29,072,118 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 6 | 29,072,200 | 29,072,200 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 6 | 29,072,382 | 29,072,382 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 6 | 29,072,389 | 29,072,389 | SNP | A/G | 1000GP (CEU) | |
| 6 | 100 | -100 | SNP | T/G | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.