OR4G2P Olfactory Receptor
| Gene Symbol | OR4G2P1 (View this gene in GeneCards) |
| Family | 4 |
| Subfamily | G |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HS14a-1-B, OR19-1, OR19-2, HsOR15.2.7P, ORL4123 |
| External Ids | HGNC: 8303 GeneBank: AB065964, AF282024, BK004679, BK004727, NG_003201 ORDB: ORL4123 |
| Build #39 labels | OR4G2P, OR4G7P |
| Chromosomal location | 15:101,926,772-101,927,641 (-) |
| Cluster | 15@102 |
| Synteny | CLIC#32 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR4G11P | 98.28% | 290 |
| OR4G1P | 98.97% | 290 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR4G11 | 83% | 289 |
| Mouse | Or4g7 | 80% | 287 |
| Rat | Or4g7 | 80% | 289 |
| Cow | OR4G2 | 84% | 290 |
| Orang | OR4G24P | 67% | 278 |
| Horse | OR4G2 | 84% | 290 |
| Chimp | OR4G2 | 98% | 290 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | BI035310 |
Sequence information
| Nucleotide sequence |
ATGCAGTTTTTCCTTTTTCTCTTCTTCTCTTTATTCTATGTGGGAATTATCCTGGGAAAC CTCTTCATTGTGTTCACAGTGATCTTTGATCCTCACTTACACTCCCCCATGTATATTCTG CTGGCCAACCTATCGCTCATTGACTTGAGCCTTTCATCTACCACAGTTCCTAGGTTGATC TACGATCTTTTTACTGATTGTAAAGTTATTTCCTTCCATAATTGTATGATACAAAAGTTC TTTATCCATGTTACGGGAGGAGTTGAAATGGTGCTGCTGATAGTCATGGCATATGATAGG TACACTGCGATCTGCAAACCTCTCCACTATCCAACTATTATGAATCCCAAAATGTGCATG TTTTTGGTAGCAGCAGCTTGGGTCATTGGGGTGATTCATGCTATGTCTCAGTTTGTTTTT GTCATAAATTTACCCTTCTGTGGCCCTAATAATGTGGGGAGCTTTTATTGTGATTTTCCT CGGGTTATTAAACTTGCATGCATGGACACTTATGGGCTAGAATTTGTGGTCACTGCCAAC AGTGGATTCATATCGATGGGCACCTTCTTTTTCTTAATTGTATCATACATTTTTATTCTG GTCACTGTCCAACGACATTCCTCAAATGATTTATCCAAAGCATTCTTCACTTCGTAGGCT CACATCACCGTAGTGGTTTTGTTTTTTGCTCCATGCATGTTTCTCTACGTGTGGCCTTTC CCTACTAAGTCATTGGATAAATTTTTTGCCATCATGAACTTTGTTGTCACCCCTGTCTTA AATCCTGCCATCTATACTTTAAGGAACAAAGATATGAAGTTTGCAATGAGAAGGCTGAAT CAACATATTTTAAATTCTATGGAGATGACA |
| Conceptual translation |
MQFFLFLFFSLFYVGIILGNLFIVFTVIFDPHLHSPMYILLANLSLIDLSLSSTTVPRLI YDLFTDCKVISFHNCMIQKFFIHVTGGVEMVLLIVMAYDRYTAICKPLHYPTIMNPKMCM FLVAAAWVIGVIHAMSQFVFVINLPFCGPNNVGSFYCDFPRVIKLACMDTYGLEFVVTAN SGFISMGTFFFLIVSYIFILVTVQRHSSNDLSKAFFTSXHITVVVLFFAPCMFLYVWPF PTKSLDKFFAIMNFVVTPVLNPAIYTLRNKDMKFAMRRLNQHILNSMEMT Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 15 | 102,467,189 | 102,467,189 | SNP | T/G | rs2907078 (DbSNP) | |
| 15 | 102,467,332 | 102,467,332 | SNP | G/A | rs1345261 (DbSNP) | |
| 15 | 102,467,343 | 102,467,343 | SNP | T/C | rs3842848 (DbSNP) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 15 | 102,391,933 | 102,520,985 | CopyNumber | Variation_72386 (DGV) |
| 15 | 102,445,101 | 102,519,236 | CopyNumber | Variation_30727 (DGV) |
| 15 | 102,446,317 | 102,520,985 | CopyNumber | Variation_72385 (DGV) |
| 15 | 102,447,429 | 102,515,822 | CopyNumber | Variation_77144 (DGV) |
| 15 | 102,454,764 | 102,508,554 | CopyNumber | Variation_77146 (DGV) |
| 15 | 102,454,764 | 102,515,822 | CopyNumber | Variation_87921 (DGV) |
| 15 | 102,459,407 | 102,519,236 | CopyNumber | Variation_32067 (DGV) |
| 15 | 102,462,099 | 102,488,994 | CopyNumber | Variation_77147 (DGV) |
| 15 | 102,462,099 | 102,491,577 | CopyNumber | Variation_87920 (DGV) |
| 15 | 102,462,099 | 102,503,664 | CopyNumber | Variation_87922 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.