OR5AO1P Olfactory Receptor
Gene Symbol | OR5AO1P1 (View this gene in GeneCards) |
Family | 5 |
Subfamily | AO |
Pseudogene | Yes |
CORP pseudogene probability score | |
Aliases | |
External Ids | HGNC: 31285 GeneBank: NG_004427 |
Build #39 labels | |
Chromosomal location | 11:57,045,079-57,045,409 (+) |
Cluster | 11@57 |
Synteny | CLIC#26 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR5AK1P | 52.27% | 88 |
OR5AK2 | 53.41% | 88 |
OR5AK3P | 54.02% | 87 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|
Sequence information
Nucleotide sequence |
ACACCACTGTGATTGATGGTGGTCATCTTTTCCCAGGTATATACCCTGGCTGCTATCCCG AAGATGTCTTCCACTGCAGGAAGGACACAAGGCTTCTTCATGTGAGCTTCCCACCTGACG AGCAGTTGTCATTTTCTATGGCACTCCCTCTTACATGTATCTACACCATGGGAACAACGG GTCTCCAAAGCAGGGGAAAGTGTCATCTGTGTTCTATGGCATTGTGATTGATCTGCAGCC TGAGAGTCCAAGATGCGAGAGAAGCTCTAAAAGAAAAAGGAAAGAAGCAGTTCTAGATTG GGCCTCAGTTTCTAATTCTCTGCACTTGTAG |
Conceptual translation |
TPLXVVIFSQVYTLAAIPKMSSTAGRTQGFFMXSHLT\VVIFYGTPSYMYLHHGNNG SPKQGKVSSVFYGIVIDLQPE/SKMREKLXKKERSSSRLGLSFXSALV Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 56,812,739 | 56,812,739 | SNP | A/C | rs4550239 (DbSNP) | |
11 | 56,812,605 | 56,812,605 | SNP | G/T | rs35195541 (DbSNP) | |
11 | 57,045,130 | 57,045,130 | SNP | G/T | 1000GP (CEU) | |
11 | 57,045,137 | 57,045,137 | SNP | C/T | 1000GP (CEU) | |
11 | 57,045,264 | 57,045,264 | SNP | C/A | 1000GP (CEU) | |
11 | 100 | -100 | SNP | C/T | 1000GP (YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.