OR8B9P Olfactory Receptor
| Gene Symbol | OR8B9P1 (View this gene in GeneCards) |
| Family | 8 |
| Subfamily | B |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-313, HsOR11.18.38P, ORL3531 |
| External Ids | HGNC: 14746 GeneBank: AF179764, AF179765, BK004640, NG_002322 ORDB: ORL3531 |
| Build #39 labels | OR8B9P |
| Chromosomal location | 11:124,481,000-124,481,928 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR8B10P | 83.06% | 307 |
| OR8B12 | 80.06% | 311 |
| OR8B8 | 76.24% | 303 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR8B9 | 87% | 311 |
| Dog | OR8B9B | 84% | 283 |
| Mouse | Or8b9 | 84% | 308 |
| Rat | Or8b9 | 83% | 308 |
| Cow | OR8B9 | 86% | 311 |
| Cow | OR8B9C | 83% | 311 |
| Orang | OR8B10 | 84% | 307 |
| Horse | OR8B9 | 86% | 311 |
| Chimp | OR8B10P | 81% | 307 |
Sequence information
| Nucleotide sequence |
ATGCCTGCCAAGAACTCCTCCTCCGTGACAGCGTTTATCCTCTCAGGCTTAACCGACCAG CCGGGACTCCAGATCCCCGCCTTCTTCCTGTTTCTAGGTTTCTACGCGGTCACGGTGGTG GGGAACCTGGGCTTGATAATCCTGATAGGGCTCAACTCTCGCCTGCATATCCCCATGTAC TTTTTCCCCTTCAACTTGTCCTTCATAGATTTTAGTTATTCCACTACCCTCGCCCCTAAA ATGCTGATGAGCTTTGTCTCAGAGAACATCATTTCCTATGCAGGGTGTATGACTCAGCTT TTTTTCTTCTGTTTCTTTGTCTTTTCTGAATCCTATATTCTATCAGCGATGGCGTATGAC CGCTACGTGGGCATCTGTAACCCACTGTTGTACACGGTCACCATGTCTCCCCAGATGTGT TTGCTCCTTTTACTGGGTGTCTATGGGATGGGGATTTTGGGGCTGTGGCTCATATGGGAA ACATAATGTTTATGTCCTTTTGTGGAGACAACCTTGTCAATCACTATATGTGTGACATCC TTCCTCTCCTTGAGCTCTCCTGCAACAGCTCTTACATAAATTTGCTGGTGGTTTTTATTA TTGTGACCGTTGGCATTGGGGTGCCGATTGTCACCATTTTTCTCTCTTATGGTTTTATTC TTTCCAGCATTCTCCACATTAGTTCCACAGAGGGCAGGTCTAAAGCCTTCAGTACCTGCA GTTCCCACATAATTGTGGTATCGCTTTTCTTTGGGTCAGGTGCTTTCATGTACCTCAAAC CACCTTCTATTCTACCCCTGGACCAGGGGAAAGTGTCCTCCATTTTTTGTACTGCTGTGG TGCCCATGTTTAACCCATTAATCTACAGCCTGAGGAATAAAGATGTCAAAGTTGCCCTGA GGAGAACCTTTTGCAGAAAATTAGTCTCT |
| Conceptual translation |
MPAKNSSSVTAFILSGLTDQPGLQIPAFFLFLGFYAVTVVGNLGLIILIGLNSRLHIPMY FFPFNLSFIDFSYSTTLAPKMLMSFVSENIISYAGCMTQLFFFCFFVFSESYILSAMAYD RYVGICNPLLYTVTMSPQMCLLLLLGVYGMGIL/AVAHMGNIMFMSFCGDNLVNHYMCD ILPLLELSCNSSYINLLVVFIIVTVGIGVPIVTIFLSYGFILSSILHISSTEGRSKAFST CSSHIIVVSLFFGSGAFMYLKPPSILPLDQGKVSSIFCTAVVPMFNPLIYSLRNKDVKVA LRRTFCRKLVS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 124,351,079 | 124,351,079 | Del(1) | -/A | rs72512176 (DbSNP) | |
| 11 | 124,351,080 | 124,351,080 | Del(1) | -/A | rs11361196 (DbSNP) | |
| 11 | 124,351,077 | 124,351,077 | Del(1) | -/A | rs35849638 (DbSNP) | |
| 11 | 124,351,747 | 124,351,746 | Ins(1) | -/G | rs35237847 (DbSNP) | |
| 11 | 124,351,409 | 124,351,409 | SNP | A/T | rs4492834 (DbSNP) | |
| 11 | 124,351,344 | 124,351,344 | SNP | C/T | rs7941255 (DbSNP) | |
| 11 | 124,481,448 | 124,481,448 | SNP | T/C | 1000GP (CEU, CHBJPT) | |
| 11 | 124,481,513 | 124,481,513 | SNP | A/T | 1000GP (CEU, CHBJPT) | |
| 11 | 124,481,200 | 124,481,200 | SNP | T/C | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | T/C | 1000GP (YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.