OR10AE1P Olfactory Receptor
| Gene Symbol | OR10AE1P1 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | AE |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | ORL3080 |
| External Ids | HGNC: 14990 GeneBank: NG_004277 ORDB: ORL3080 |
| Build #39 labels | OR10AE1P, OR10AE2P |
| Chromosomal location | 1:159,581,623-159,582,220 (-) |
| Cluster | 1@159b |
| Synteny | CLIC#4 |
| Remarks | Disrupted by Line repeat |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10J5 | 42.92% | 212 |
| OR10J6P | 45.7% | 186 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10J14 | 44% | 194 |
| Mouse | Or10j5 | 42% | 186 |
| Rat | Or10j5 | 44% | 195 |
| Cow | OR10J1B | 44% | 186 |
| Orang | OR10J5 | 46% | 186 |
| Horse | OR10J5 | 45% | 184 |
| Chimp | OR10J5 | 45% | 186 |
Sequence information
| Nucleotide sequence |
GATCTTTGCCATCTTGACCACCATTGACTGCTGTGTATTTGTCTGGGAATTCCTGGAGTG CACAGTCTTTGTGAATAAGAGGGCATGTGCCCAGCTGGCGTGTGGTGCCTTTTGCATTGG CCTGATCATGACAGTGGTCTAAATAACCACAGTGTCACAGAGGTACAAAAGGAGCACATA TGCTATTTAGACTGCTTCTTGTTTGACACCCTTCTTGTCATGAAACTCTCCTGCATTGAC AATACTATCTATGAAATAAACAGTATTTTATTCACCACACATGTGTGCAGGTGTCCATGG GTTTGGTTTGCATTTCCTATATTGACATCCCTGTTACCTCCATCGTGCTTAGAATTTCCT AATCTGAGGTCTTTGCCACCTGTGTCCCCCAACCCCCACCTCATCATGGTCATTGTCTAT ATGTCTGTGCTTGTACTGCTTACCTCAAGCACAAGCCAATGAATTCAATAGAAAACAGGT CTTCTATAAGAGACCTACATTATCATCATTCATTCTGCCTCTGGACACTGTTGTTTACAC TCTGAGGTACATGGAGGCCAAGGATACCATGTACAGAGCTGTGGACAGAAATATTTCT |
| Conceptual translation |
IFAILTTIDCCVFVWEFLECTVFVNKRACAQLACGAFCIGLIMTVVXTTVSQRYKRSTY AI/DCFLFDTLLVMKLSCIDNTIYEI/QYFIHHTCVQVSMGLVCISYIDIPVTSIVLR ISXEVFATC\PNPHLIMVIV/YVCACTAYLKHKPMNSIE\GLLXTYIIIIHSASG \VVYTLRYMEAKDTMYRAVDRNIS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 1 | 100 | -100 | SNP | A/T | 1000GP (YRI, YRI) | |
| 1 | 159,551,556 | 159,551,555 | Ins(1) | -/G | rs35201484 (DbSNP) | |
| 1 | 159,551,957 | 159,551,957 | SNP | C/A | rs2197619 (DbSNP) | |
| 1 | 159,581,788 | 159,581,788 | SNP | C/A | 1000GP (CHBJPT) | |
| 1 | 159,582,167 | 159,582,167 | SNP | A/C | 1000GP (CEU, CHBJPT) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.