OR5AZ1P Olfactory Receptor
| Gene Symbol | OR5AZ1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | AZ |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-223, HsOR11.12.2P, ORL3617 |
| External Ids | HGNC: 15262 GeneBank: AB065549, AF399500, BK004802, NG_004207 ORDB: ORL3617 |
| Build #39 labels | OR5AZ1P |
| Chromosomal location | 11:57,917,302-57,918,230 (-) |
| Cluster | 11@58 |
| Synteny | CLIC#27 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5AR1 | 50.33% | 300 |
| OR5BA1P | 50.33% | 300 |
| OR9H1P | 49.02% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5AZ2 | 62% | 291 |
| Mouse | Or5p55 | 51% | 300 |
| Rat | Or5p56b-ps | 52% | 300 |
| Cow | OR5AZ2 | 59% | 303 |
| Orang | OR5BA1 | 51% | 300 |
| Horse | OR5AZ1 | 81% | 309 |
| Chimp | OR5BA1 | 51% | 300 |
Expression evidences
| Source | Accession |
|---|---|
| GNF Atlas2 | gnf1h10859_at |
Sequence information
| Nucleotide sequence |
ATGGTGGAGAACCACACCCAAGTCACCTGGTTCCGCCTGCTGGGACTTACAGAGCAGGAG GAGCTCAGAGGCATCCTCTTTGTGCTCTTCCTGCTCATGCATTCAGTCACTGTTATGGGC AACCTGGGAATGATCACTCTGATCCATGCAGACCCACAGCTCCACACCCCCATGTATTTC TTCCTGAGCGTCCTATCCTTGATAGACTCCTCGTTTTCCACAGTGGACATCCCCAGGCTG CTGGAGAGCTTCCTCATCTCAAGCCAATCCATCTCCTTTGCAGGCTGTATGGTCCAGATG GCCCTCATGATCCTCCATGGTACTGCTGAGTGTCTGCTCCTGGCCATCATGGCCTATGAC CGATTCACCGCCATCTGCCACCCTCTCCTCTATCACACTATTATATCCCAATGTCTGTGT GCCCTGCTGGTGGTGACCTGCTATACTGTTTCTGTTGCCAATTCAGCTTTGCTGACTGGG TGCATCTTTAAGCTGCCCTACTGTGGCCCCAATGTCATTAACCACTATTTCTGTGACATC CCCCCTGTGCTCCAACTTGCCGGTGCAGATACTACGAGGTTGAGACCATTATCTTCTCAT TGTGTGCCTTGCTCATCCTCTTTACCATCACCATTATCCCAGTCTCCTATGCCTACATCC TCGTGACCATTTGCAGGATGCGCTCCCTGCAAGCCCAGAGCAAAGCTCTCTCCACCTGTG CCTCCCACCTCACCATCATCTGCCTCTTCTATAGCACCATCACCTTCATGTATGCTCAGC CAAGCTCTCACAATTCCATGGAACACAACAAGGTCATGTCTGTCTTCTACACTGTGGTCA TCCGCAGGCTGAACCCTCTGATCTACAGCCTGAGGAATAAAGATGTAAAATATGCTTTGA AGAGGAGATGCCTGTGCAAGCTGTCTTCA |
| Conceptual translation |
MVENHTQVTWFRLLGLTEQEELRGILFVLFLLMHSVTVMGNLGMITLIHADPQLHTPMYF FLSVLSLIDSSFSTVDIPRLLESFLISSQSISFAGCMVQMALMILHGTAECLLLAIMAYD RFTAICHPLLYHTIISQCLCALLVVTCYTVSVANSALLTGCIFKLPYCGPNVINHYFCDI PPVLQLAGAD/YEVETIIFSLCALLILFTITIIPVSYAYILVTICRMRSLQAQSKALST CASHLTIICLFYSTITFMYAQPSSHNSMEHNKVMSVFYTVVIRRLNPLIYSLRNKDVKYA LKRRCLCKLSS Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 57,684,949 | 57,684,949 | SNP | A/C | rs615133 (DbSNP) | |
| 11 | 57,685,334 | 57,685,334 | SNP | A/G | rs616911 (DbSNP) | |
| 11 | 57,685,502 | 57,685,502 | SNP | C/G | rs621683 (DbSNP) | |
| 11 | 57,685,196 | 57,685,196 | SNP | G/A | rs633129 (DbSNP) | |
| 11 | 57,685,473 | 57,685,473 | SNP | G/A | rs621731 (DbSNP) | |
| 11 | 57,917,477 | 57,917,477 | SNP | C/A | 1000GP (CEU, CHBJPT) | |
| 11 | 57,917,724 | 57,917,724 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 57,917,862 | 57,917,862 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 57,918,001 | 57,918,001 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 57,917,885 | 57,917,885 | SNP | T/C | 1000GP (CHBJPT) | |
| 11 | 57,918,150 | 57,918,150 | SNP | A/G | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | C/A | 1000GP (YRI, YRI, YRI, YRI, YRI, YRI) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.