OR5E1P Olfactory Receptor
| Gene Symbol | OR5E1P1 (View this gene in GeneCards) |
| Family | 5 |
| Subfamily | E |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | OR11-90, OR5E1P, OR11-95, HSTPCR24, HsOR11.5.6P, ORL3492 |
| External Ids | HGNC: 8342 GeneBank: AB065769, AF309702, BK004573, BK004582, HSTPCR24P, NG_004124 ORDB: ORL3492 |
| Build #39 labels | OR5E1P |
| Chromosomal location | 11:7,848,700-7,849,632 (+) |
| Cluster | 11@8 |
| Synteny | CLIC#25 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR5F2P | 55.31% | 311 |
| OR5M13P | 56.31% | 309 |
| OR5M5P | 53.59% | 306 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR5E1 | 88% | 309 |
| Mouse | Or5e1 | 88% | 309 |
| Rat | Or5e1 | 88% | 309 |
| Cow | OR5E1 | 90% | 310 |
| Orang | OR5G3 | 54% | 310 |
| Horse | OR5E1 | 86% | 310 |
| Chimp | OR5M13 | 56% | 309 |
Expression evidences
| Source | Accession |
|---|---|
| ESTs | FN157866 |
| mRNA | AB529251 |
| GNF Atlas2 | gnf1h10966_at |
Sequence information
| Nucleotide sequence |
ATGACAAAAGGCAATCGTACCACAGTGACCGAATTTGTCCTCATGGGATTCACAGACCGT CCTGAGCTGCAGCTCCCCCTCTTTGTGGTGTTCCTTGTCATTTATCTCATCACCCTGGTG GGAAACCTTGGCATGATCCTGCTGATCAGAGCAGACTCGCGGCTCCACACCCCCATGTAC TACTTCCTCAGTCACCTGGCATTCATTGATCTGTGTTACTCATCTTCTATTGGGCCCAAG ATGCTGCAAAATGTATTGGTGAAGAAAAAAACCATCTCCTTTTCAGGCTGTTTTGCTCAG CTGTACTTCTCCGGTGCTTTTGCCACTACAGAATGATTCCTCTTGGCCACAATGCCCTAC GACCGCTACGTGGCCATCTGCAACCCCCTGATTTACACAGCTATTATGACGCAGCGGGTC TGCAGGGAGTTAGTGATAGGGGTCTATACCTATGGCTTCCGAAACTCTGTGATACAGACA GCTCTGACGTTTCAGCTGTCTTTCTGCAACTCCGACGTCATCCACCACTTCTACTGTGCT GACCCCCCTCTCCTGGCCCTCTCCTGCTCTGACACCCACAACAAAGAAAAGCAGCTCATG ATCTTCTCTGCAGTAAATCTCACTGGGTCCCTCCTTACCATCTTCATCTCCTACATTTGC ATCCTCTTTTCCATTATAAAAATCCAGTCTTCCGAGGGCAAGTGCAGAGCATTTTCCACC CGTGCCTCCCACCTCACTGTCGTCACCATCTTTTATGGCACACTATTTTTCATGTACCTG CAGCAACCAAAAGCGGGGAATTCATGGAAGCCAAACAAAGTAGTCTCTGTGTTTTATAGT CTTGTAATTCCCATGCTTAACCCTCTTATCTATCGCCTGAGAAACACAGAAGTAAAGGAT GCCCTGAAAAAAATGCTAGAGGGCAAAGAGTTA |
| Conceptual translation |
MTKGNRTTVTEFVLMGFTDRPELQLPLFVVFLVIYLITLVGNLGMILLIRADSRLHTPMY YFLSHLAFIDLCYSSSIGPKMLQNVLVKKKTISFSGCFAQLYFSGAFATTEXLLATMPY DRYVAICNPLIYTAIMTQRVCRELVIGVYTYGFRNSVIQTALTFQLSFCNSDVIHHFYCA DPPLLALSCSDTHNKEKQLMIFSAVNLTGSLLTIFISYICILFSIIKIQSSEGKCRAFST RASHLTVVTIFYGTLFFMYLQQPKAGNSWKPNKVVSVFYSLVIPMLNPLIYRLRNTEVKD ALKKMLEGKEL Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 7,871,016 | 7,871,016 | Del(1) | -/T | rs35679714 (DbSNP) | |
| 11 | 7,871,011 | 7,871,011 | SNP | A/G | rs4758022 (DbSNP) | |
| 11 | 7,870,668 | 7,870,668 | SNP | A/G | rs16932833 (DbSNP) | |
| 11 | 7,870,670 | 7,870,670 | SNP | A/G | rs61759825 (DbSNP) | |
| 11 | 7,870,760 | 7,870,760 | SNP | A/G | rs17221305 (DbSNP) | |
| 11 | 7,870,442 | 7,870,442 | SNP | C/G | rs393912 (DbSNP) | |
| 11 | 7,870,631 | 7,870,631 | SNP | C/G | rs11041601 (DbSNP) | |
| 11 | 7,870,777 | 7,870,777 | SNP | T/C | rs383999 (DbSNP) | |
| 11 | 7,849,123 | 7,849,123 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 7,849,213 | 7,849,213 | SNP | G/A | 1000GP (CEU, CHBJPT) | |
| 11 | 7,849,464 | 7,849,464 | SNP | A/G | 1000GP (CEU, CHBJPT) | |
| 11 | 7,848,994 | 7,848,994 | SNP | G/T | 1000GP (CHBJPT) | |
| 11 | 100 | -100 | SNP | A/G | 1000GP (YRI, YRI, YRI) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 7,858,828 | 7,891,030 | CopyNumber | Variation_35022 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR5E1P.aApr07-unspliced | main_exon | CDS_partial | chr11 | 7,849,051 | 7,849,562 | + |