OR6W1P Olfactory Receptor
| Gene Symbol | OR6W1P1 (View this gene in GeneCards) |
| Family | 6 |
| Subfamily | W |
| Pseudogene | Yes |
| CORP pseudogene probability score | |
| Aliases | HsOR7.6.3P |
| External Ids | HGNC: 15091 GeneBank: AB065875, AB065957, AF286696, AF399607, BC069382, BC074961, BC074962, NR_002140 |
| Build #39 labels | OR6W1 |
| Chromosomal location | 7:143,062,493-143,063,434 (-) |
| Cluster | 7@143a |
| Synteny | CLIC#15 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR6J1 | 50% | 306 |
| OR6S1 | 49.16% | 299 |
| OR6V1 | 52.88% | 295 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR6W1 | 83% | 310 |
| Mouse | Or6s1 | 47% | 296 |
| Rat | Or6e1 | 47% | 302 |
| Cow | OR6V1P | 54% | 295 |
| Orang | OR6W2 | 72% | 298 |
| Horse | OR6W1 | 83% | 310 |
| Chimp | OR6V1 | 53% | 295 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | BC074962 |
| GNF Atlas2 | gnf1h01153_at |
Sequence information
| Nucleotide sequence |
GTGAACAAAGGTCTCTGGTTTTCCTAGGCAGAGGAGCTCCTTGGATTTTCTTATCTCCAT GAGTTCCAGGTTCTGCTGTTTGCTCTGATCCTGTTGATATATGTGCTGATGCTGCTGGGC AACCTGGCCATCATCAGCTTCATTTGCCTTGATTCCCGCCTTCACTCACCCATGTACTTC TTCCTCTGCAACTTCTCCCTCATGGAGATGGTGGTCACCTCCACTGTGGTACATAGGATG CTGGCAGACCTGCTATCCACTCACAAGACCATGTCCCTGGCCAAATGCCTAACCCAGTCT TTCTTTTACTTCTCCCTGGGCTCTGCCAACTTCCTGATACTCATGGTCATGGCCTTTGAT CGCTACGTGGCCATCTGCCACCCCCTGCGCTACCCAACCATCACGAATGGTCCAGTGTGT GTGAAGCTGGTGGTGGCCTGTTGGGTGGTTGGTTTCCTCTCCATTGTCTCTCCCACACTG CAGAAAACACGACTCTGGTTCTGTGGCCCTAACATCATCGGCCACTACTTCTGTGACTCT GCCCCGCTGCTCAAGCTTGCCTGCTCTGACACCCGCCACATTGAGCGCATGGACCTCTTC CTGTCCCTGCTCTTTGTGCTGACCACCATGCTGCTTATCATCCTCTCCTACATCCTCATT GTGGCTGCAGTGCTGCACATCCCTTCCTCCTCTGGATGCCAGAAGGCCTTCTCCACCTGT GCCTCTCACCTCACAGTGGTGGTTCTGGGCTATGGCAGTGCCATCTTCATCTACGTGAGG CCAGGCAAGGGCCACTCCACATACCTCAACAAGGCGGTGGCCATGGTGACTGCAATGGTA ACCCCTTTCCTCAACCCCTTCATCTTCACCTTCCGGAATGAGAAGGTCAAGGAGGTCATT GAGGATGTGACTAAAAGGATCTTCCTTGGAGACCCAGCAGCC |
| Conceptual translation |
VNKGLWFSXEELLGFSYLHEFQVLLFALILLIYVLMLLGNLAIISFICLDSRLHSPMYF FLCNFSLMEMVVTSTVVHRMLADLLSTHKTMSLAKCLTQSFFYFSLGSANFLILMVMAFD RYVAICHPLRYPTITNGPVCVKLVVACWVVGFLSIVSPTLQKTRLWFCGPNIIGHYFCDS APLLKLACSDTRHIERMDLFLSLLFVLTTMLLIILSYILIVAAVLHIPSSSGCQKAFSTC ASHLTVVVLGYGSAIFIYVRPGKGHSTYLNKAVAMVTAMVTPFLNPFIFTFRNEKVKEVI EDVTKRIFLGDPAA Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 7 | 100 | -100 | SNP | C/T | 1000GP (YRI, YRI, YRI, YRI) | |
| 7 | 142,759,716 | 142,759,716 | SNP | T/C | rs61739255 (DbSNP) | |
| 7 | 142,759,807 | 142,759,807 | SNP | C/G | rs3812399 (DbSNP) | |
| 7 | 142,759,849 | 142,759,849 | SNP | T/G | rs61739257 (DbSNP) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
| Accession | Type | Chr | Start | End | Strand | |
|---|---|---|---|---|---|---|
| OR6W1P.aApr07-unspliced | main_exon | 3UTR | chr7 | 143,062,330 | 143,062,493 | - |
| CDS_partial | chr7 | 143,062,493 | 143,063,429 | - | ||