OR10G6 Olfactory Receptor
| Gene Symbol | OR10G61 (View this gene in GeneCards) |
| Family | 10 |
| Subfamily | G |
| Pseudogene | No |
| CORP pseudogene probability score | 0.97 (pseudogene) |
| Aliases | OR11-280, HsOR11.18.9 |
| External Ids | HGNC: 14836 GeneBank: AB065508, BK004312, NG_002255 |
| Build #39 labels | OR10G6P |
| Chromosomal location | 11:123,994,166-123,995,161 (-) |
| Cluster | 11@124 |
| Synteny | CLIC#29 |
| Remarks |
Most Similar ORs in Humans (Paralogs)
| Symbol | Percent | Length |
|---|---|---|
| OR10G1P | 61.28% | 297 |
| OR10G2 | 60.34% | 295 |
| OR10G3 | 58.86% | 299 |
Most Similar ORs in other species (Orthologs)
| Specie | Symbol | Percent | Length |
|---|---|---|---|
| Dog | OR10G7 | 56% | 303 |
| Mouse | Or10g6 | 90% | 319 |
| Rat | Or10g1 | 60% | 317 |
| Cow | OR10G1 | 62% | 309 |
| Orang | OR10G6P | 92% | 311 |
| Horse | OR10G1 | 61% | 309 |
| Chimp | OR10G6P | 97% | 311 |
Expression evidences
| Source | Accession |
|---|---|
| mRNA | AB529275 |
| GNF Atlas2 | gnf1h10675_at |
Sequence information
| Nucleotide sequence |
ATGTTAGAGGGTGTTGAGCATCTCCTTCTGCTACTTCTTTTGACAGATGTGAACAGCAAG GAACTGCAAAGTGGAAACCAGACTTCTGTGTCTCACTTCATTTTGGTGGGCCTGCACCAC CCACCACAGCTGGGAGCGCCACTCTTCTTAGCTTTCCTTGTCATCTATCTCCTCACTGTT TCTGGAAATGGGCTCATCATCCTCACTGTCTTAGTGGACATCCGGCTCCATCGTCCCATG TGCTTGTTCCTGTGTCACCTCTCCTTCTTGGACATGACCATTTCTTGTGCTATTGTCCCC AAGATGCTGGCTGGCTTTCTCTTGGGTAGTAGGATTATCTCCTTTGGGGGCTGTGTAATC CAACTATTTTCTTTCCATTTCCTGGGCTGTACTGAGTGCTTCCTTTACACACTCATGGCT TATGACCGTTTCCTTGCCATTTGTAAGCCCTTACACTATGCTACCATCATGACCCACAGA GTCTGTAACTCCCTGGCTTTAGGCACCTGGCTGGGAGGGACTATCCATTCACTTTTCCAA ACAAGTTTTGTATTCCGGCTGCCCTTCTGTGGCCCCAATCGGGTCGACTACATCTTCTGT GACATTCCTGCCATGCTGCGTCTAGCCTGCGCCGATACGGCCATCAACGAGCTGGTCACC TTTGCAGACATTGGCTTCCTGGCCCTCACCTGCTTCATGCTCATCCTCACTTCCTATGGC TATATTGTAGCTGCCATCCTGCGAATTCCGTCAGCAGATGGGCGCCGCAATGCCTTCTCC ACTTGTGCTGCCCACCTCACTGTTGTCATTGTTTACTATGTGCCCTGCACCTTCATTTAC CTGCGGCCTTGTTCACAGGAGCCCCTGGATGGGGTGGTAGCTGTCTTTTACACTGTCATC ACTCCCTTGCTTAACTCCATCATCTACACACTGTGCAACAAAGAAATGAAGGCAGCATTA CAGAGGCTAGGGGGCCACAAGGAAGTGCAGCCTCAC |
| Conceptual translation |
MLEGVEHLLLLLLLTDVNSKELQSGNQTSVSHFILVGLHHPPQLGAPLFLAFLVIYLLTV SGNGLIILTVLVDIRLHRPMCLFLCHLSFLDMTISCAIVPKMLAGFLLGSRIISFGGCVI QLFSFHFLGCTECFLYTLMAYDRFLAICKPLHYATIMTHRVCNSLALGTWLGGTIHSLFQ TSFVFRLPFCGPNRVDYIFCDIPAMLRLACADTAINELVTFADIGFLALTCFMLILTSYG YIVAAILRIPSADGRRNAFSTCAAHLTVVIVYYVPCTFIYLRPCSQEPLDGVVAVFYTVI TPLLNSIIYTLCNKEMKAALQRLGGHKEVQPH Protein domains and features |
Variations - SNPs
| Chr | Start | End | Type | Variation | AA Change | SNP IDs |
|---|---|---|---|---|---|---|
| 11 | 100 | -100 | NS | A/T | L/Q | 1000GP (YRI) |
| 11 | 100 | -100 | SYN | G/A | I/I | 1000GP (YRI, YRI, YRI, YRI) |
| 11 | 123,864,948 | 123,864,948 | SYN | A/G | I/I | rs17128086 (DbSNP) |
| 11 | 123,865,086 | 123,865,086 | SYN | A/C | T/T | rs7944434 (DbSNP) |
| 11 | 123,865,235 | 123,865,235 | NS | C/T | D/N | rs17128087 (DbSNP) |
| 11 | 123,865,305 | 123,865,305 | SYN | A/G | P/P | rs10790622 (DbSNP) |
| 11 | 123,865,504 | 123,865,504 | NS | A/T | L/Q | rs17128089 (DbSNP) |
| 11 | 123,865,808 | 123,865,807 | Ins(1) | -/C | rs35841023 (DbSNP) | |
| 11 | 123,865,815 | 123,865,815 | SYN | A/G | N/N | rs7127148 (DbSNP) |
| 11 | 123,994,217 | 123,994,217 | NS | T/G | E/D | 1000GP (CEU) |
| 11 | 123,994,241 | 123,994,241 | SYN | G/A | I/I | 1000GP (CEU, CHBJPT) |
| 11 | 123,994,379 | 123,994,379 | SYN | A/C | T/T | 1000GP (CEU, CHBJPT) |
| 11 | 123,994,598 | 123,994,598 | SYN | G/A | P/P | 1000GP (CEU, CHBJPT) |
| 11 | 123,995,108 | 123,995,108 | SYN | G/A | N/N | 1000GP (CHBJPT) |
Variations - CNVs
| Chr | Start | End | Type | Sources |
|---|---|---|---|---|
| 11 | 123,862,873 | 123,865,968 | Deletion, CopyNumber | #254 (Waszak) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
| E315D | F278L | D212N | C190S | R186Q | R186W | C133F | L122Q | R78H | M1T | % Freq | CORP | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | E | F | D | C | R | R | C | L | R | M | 96.47 | 0.986 |
| 2 | E | F | D | C | R | R | C | Q | R | M | 1.15 | 0.986 |
| 3 | E | F | D | C | R | W | C | L | R | M | 0.61 | 0.986 |
| 4 | E | L | D | C | R | R | C | L | H | T | 0.54 | 1.200 |
| 5 | E | F | D | C | Q | R | C | L | R | M | 0.46 | 0.986 |
| 6 | E | F | N | C | R | R | C | L | R | M | 0.31 | 0.986 |
| 7 | E | F | D | S | R | R | C | L | R | M | 0.15 | 0.986 |
| 8 | E | F | D | C | R | R | F | L | R | M | 0.15 | 0.986 |
| 9 | D | F | D | C | R | R | C | L | R | M | 0.08 | 0.986 |
| 10 | E | F | N | C | R | R | C | Q | R | M | 0.08 | 0.986 |