OR10G7 Olfactory Receptor
Gene Symbol | OR10G71 (View this gene in GeneCards) |
Family | 10 |
Subfamily | G |
Pseudogene | No |
CORP pseudogene probability score | 0.05 (functional) |
Aliases | OR11-283, HsOR11.18.14, ORL3290 |
External Ids | HGNC: 14842 GeneBank: AB065754, BK004314, NM_001004463 ORDB: ORL3290 |
Build #39 labels | OR10G7 |
Chromosomal location | 11:124,038,069-124,039,001 (-) |
Cluster | 11@124 |
Synteny | CLIC#29 |
Remarks |
Most Similar ORs in Humans (Paralogs)
Symbol | Percent | Length |
---|---|---|
OR10G4 | 91.42% | 303 |
OR10G8 | 88.1% | 311 |
OR10G9 | 90.03% | 311 |
Most Similar ORs in other species (Orthologs)
Specie | Symbol | Percent | Length |
---|---|---|---|
Dog | OR10G7BP | 85% | 311 |
Dog | OR10G9C | 87% | 291 |
Dog | OR10G9 | 87% | 291 |
Mouse | Or10g7 | 87% | 311 |
Mouse | Or10g9 | 85% | 311 |
Mouse | Or10g9b | 84% | 309 |
Rat | Or10g9 | 85% | 309 |
Rat | Or10g7-ps | 84% | 311 |
Rat | Or10g9b | 84% | 309 |
Cow | OR10G9D | 79% | 311 |
Cow | OR10G4P | 82% | 291 |
Orang | OR10G4 | 88% | 311 |
Orang | OR10G9 | 88% | 311 |
Orang | OR10G9I | 90% | 291 |
Horse | OR10G9 | 86% | 308 |
Horse | OR10G9K | 85% | 291 |
Chimp | OR10G9 | 89% | 311 |
Chimp | OR10G9D | 91% | 291 |
Expression evidences
Source | Accession |
---|---|
mRNA | AB529276 |
GNF Atlas2 | gnf1h05561_at |
Sequence information
Nucleotide sequence |
ATGTCCAACGCCACCCTACTGACAGCGTTCATCCTCACGGGCCTTCCCCATGCCCCAGGG CTGGACGCCCCCCTCTTTGGAATCTTCCTGGTGGTTTACGTGCTCACTGTGCTGGGGAAC CTCCTCATCCTGCTGGTGATCAGGGTGGATTCTCACCTCCACACCCCCATGTACTACTTC CTCACCAACCTGTCCTTCATTGACATGTGGTTCTCCACTGTCACGGTGCCCAAAATGCTG ATGACCTTGGTGTCCCCAAGCGGCAGGACTATCTCCTTCCACAGCTGCGTGGCTCAGCTC TATTTTTTCCACTTCCTGGGGAGCACCGAGTGTTTCCTCTACACAGTCATGTCCTATGAT CGCTACCTGGCCATCAGTTACCCGCTCAGGTACACCAACATGATGACTGGGCGCTCGTGT GCCCTCCTGGCCACCGGCACTTGGCTCAGTGGCTCTCTGCACTCTGCTGTCCAGACCATA TTGACTTTCCATTTGCCCTACTGTGGACCCAACCAGATCCAGCACTACTTCTGTGACGCA CCGCCCATCCTGAAACTGGCCTGTGCAGACACCTCAGCCAACGAGATGGTCATCTTTGTG AATATTGGGCTAGTGGCCTCGGGCTGCTTTGTCCTGATAGTGCTGTCCTATGTGTCCATC GTCTGTTCCATCCTGCGGATCCGCACCTCAGAGGGGAGGCACAGAGCCTTTCAGACCTGT GCCTCCCACTGTATCGTGGTCCTTTGCTTCTTTGGCCCTGGTCTTTTCATTTACCTGAGG CCAGGCTCCAGGGACGCCTTGCATGGGGTTGTGGCCGTTTTCTACACCACGCTGACTCCT CTTTTCAACCCTGTTGTGTACACCCTGAGAAACAAGGAGGTAAAGAAAGCTCTGTTGAAG CTGAAAAATGGGTCAGTATTTGCTCAGGGTGAA |
Conceptual translation |
MSNATLLTAFILTGLPHAPGLDAPLFGIFLVVYVLTVLGNLLILLVIRVDSHLHTPMYYF LTNLSFIDMWFSTVTVPKMLMTLVSPSGRTISFHSCVAQLYFFHFLGSTECFLYTVMSYD RYLAISYPLRYTNMMTGRSCALLATGTWLSGSLHSAVQTILTFHLPYCGPNQIQHYFCDA PPILKLACADTSANEMVIFVNIGLVASGCFVLIVLSYVSIVCSILRIRTSEGRHRAFQTC ASHCIVVLCFFGPGLFIYLRPGSRDALHGVVAVFYTTLTPLFNPVVYTLRNKEVKKALLK LKNGSVFAQGE Protein domains and features |
Variations - SNPs
Chr | Start | End | Type | Variation | AA Change | SNP IDs |
---|---|---|---|---|---|---|
11 | 100 | -100 | NS | G/A | T/M | 1000GP (YRI, YRI, YRI, YRI, YRI) |
11 | 100 | -100 | SYN | G/T | P/P | 1000GP (YRI) |
11 | 123,909,049 | 123,909,049 | SYN | G/T | I/I | rs12291067 (DbSNP) |
11 | 123,909,073 | 123,909,073 | SYN | C/G | L/L | rs11219419 (DbSNP) |
11 | 123,909,099 | 123,909,099 | NS | G/T | L/I | rs59358830 (DbSNP) |
11 | 123,909,172 | 123,909,172 | SYN | A/G | D/D | rs28414940 (DbSNP) |
11 | 123,909,194 | 123,909,194 | NS | C/T | R/Q | rs55868851 (DbSNP) |
11 | 123,909,302 | 123,909,302 | NS | C/G | S/T | rs513591 (DbSNP) |
11 | 123,909,311 | 123,909,311 | NS | C/T | S/N | rs472442 (DbSNP) |
11 | 123,909,342 | 123,909,342 | SYN | A/G | L/L | rs470242 (DbSNP) |
11 | 123,909,441 | 123,909,441 | NS | T/C | T/A | rs470208 (DbSNP) |
11 | 123,909,627 | 123,909,627 | NS | C/T | V/I | rs11219420 (DbSNP) |
11 | 123,909,637 | 123,909,637 | SYN | G/T | P/P | rs4936889 (DbSNP) |
11 | 123,909,650 | 123,909,650 | NS | C/G | G/A | rs3894199 (DbSNP) |
11 | 123,909,653 | 123,909,653 | NS | G/T | P/Q | rs4998340 (DbSNP) |
11 | 123,909,656 | 123,909,656 | NS | G/A | A/V | rs3894198 (DbSNP) |
11 | 123,909,671 | 123,909,671 | NS | A/G | M/T | rs11827843 (DbSNP) |
11 | 123,909,695 | 123,909,695 | NS | C/G | S/T | rs3894197 (DbSNP) |
11 | 124,038,392 | 124,038,392 | NS | G/T | L/I | 1000GP (CHBJPT) |
11 | 124,038,595 | 124,038,595 | NS | G/C | T/S | 1000GP (CHBJPT) |
11 | 124,038,635 | 124,038,635 | SYN | G/A | L/L | 1000GP (CEU) |
11 | 124,038,930 | 124,038,930 | SYN | G/T | P/P | 1000GP (CEU, CHBJPT) |
11 | 124,038,988 | 124,038,988 | NS | G/C | T/S | 1000GP (CEU, CHBJPT) |
Variations - CNVs
Chr | Start | End | Type | Sources |
---|---|---|---|---|
11 | 123,908,157 | 123,920,660 | CopyNumber | Variation_86062 (DGV) |
Haplotypes
Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.
T277M | L204I | S192* | R138H | T136S | N133S | G20A | P19Q | A18V | T13M | T5S | % Freq | CORP | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | T | L | S | R | T | N | G | P | A | T | S | 37.56 | 0.138 |
2 | T | L | S | R | T | N | G | P | A | T | T | 23.04 | 0.138 |
3 | T | L | S | R | T | N | A | Q | V | T | S | 15.44 | 0.138 |
4 | T | L | S | R | T | N | G | P | A | M | T | 7.07 | 0.138 |
5 | T | I | S | R | T | N | G | P | A | T | S | 6.61 | 0.138 |
6 | T | L | S | R | S | S | A | Q | V | T | S | 3.84 | 0.138 |
7 | M | L | S | R | T | N | G | P | A | T | T | 2.53 | 0.138 |
8 | T | L | * | R | T | N | G | P | A | T | T | 1.23 | 1.200 |
9 | T | L | S | R | S | S | G | P | A | T | S | 1.15 | 0.138 |
10 | M | L | S | R | T | N | A | Q | V | T | S | 0.23 | 0.138 |
11 | M | L | S | R | T | N | G | P | A | T | S | 0.23 | 0.138 |
12 | T | L | S | H | T | N | G | P | A | T | T | 0.23 | 0.138 |
13 | T | L | * | H | T | N | A | Q | V | T | S | 0.15 | 1.200 |
14 | T | I | * | R | T | N | G | P | A | T | T | 0.15 | 1.200 |
15 | T | I | S | R | S | S | G | P | A | T | S | 0.08 | 0.138 |
16 | M | L | * | R | T | N | G | P | A | T | T | 0.08 | 1.200 |
17 | T | L | S | R | T | N | G | P | A | M | S | 0.08 | 0.138 |
18 | T | I | S | R | T | N | G | P | A | T | T | 0.08 | 0.138 |
19 | T | L | S | R | T | S | G | P | A | T | T | 0.08 | 0.138 |
20 | T | L | * | H | T | N | G | P | A | T | T | 0.08 | 1.200 |
21 | T | L | S | R | S | S | G | Q | V | T | S | 0.08 | 0.138 |
AceView Gene Models
The information is based on AceView gene models, constructed from cDNA sequences. The information might be incomplete.
Accession | Type | Chr | Start | End | Strand | |
---|---|---|---|---|---|---|
OR10G7.aApr07-unspliced | main_exon | 3UTR | chr11 | 124,038,066 | 124,038,069 | - |
CDS | chr11 | 124,038,069 | 124,039,001 | - |