Search Olfactory receptors

(e.g. OR1G1, AF087928, Segregating Pseudo)

Select ORs from

Family: Subfamily:

Chromosome:

OR1D3P Olfactory Receptor

Gene Symbol OR1D3P1 (View this gene in GeneCards)
Family 1
Subfamily D
Pseudogene Yes
CORP pseudogene probability score
Aliases OR11-13, OR11-22, OR17-23, OR17-5, OR17-90, OR17-12, HsOR17.1.9P, ORL3753
External Ids HGNC: 8184   GeneBank: AB065571, AB065606, AF065866, AF065868, AF087919, AF399371, AF546336-AF546349, BK004728, BK004762, HSU04679, HSU04685, NG_002298   ORDB: ORL3753   
Build #39 labels OR1D6P, OR1D3P
Chromosomal location 17:3,265,611-3,266,562 (+)
Cluster 17@3b
Synteny CLIC#39
Remarks

Most Similar ORs in Humans (Paralogs)

Symbol Percent Length
OR1D2 84.98% 313
OR1D4 83.83% 303
OR1D5 83.17% 303

Most Similar ORs in other species (Orthologs)

Specie Symbol Percent Length
Dog OR1D10P 80% 335
Dog OR1D3BP 80% 313
Mouse Or1d2 83% 313
Rat Or1d2 83% 313
Cow OR1D3 82% 310
Cow OR1D3B 80% 312
Orang OR1D3 92% 313
Horse OR1D3 86% 313
Chimp OR1D2 86% 313
Chimp OR1D4B 85% 311
Chimp OR1D4 83% 311

Sequence information

Nucleotide sequence ATGGATGGAGGCAACCAGAGTGAAGGTTCAGAGTTCCTTCTCCTGGGGATCTCAGAGAGT
CCTGAGCAGCAGCAGATGCTGTTTTGGATGTTCCTGGTCAGGTACCTGGTCACGGTGCTG
GGAAATGTGCTCATCATCCTGGCCATCAGCTCTGATTCCCGCCTGCACACCCCCATGTAC
TTCTTCCTGGCCAACCTCTCCTTCACTGACCTCTTCTTTGTCACCAACACAATCCCCAAG
ATGCTGGTGAACCTCCAGTCCCAGAACAAAGCCATCTCCTACACAGGGTGTCTGACACAG
CTCTACTTCCTGGTCTCCTTGGTGGCCCTGGACAACCTCAACCTGGCCGTGATGGCGTAT
GATCGCTATGTGGCCATCTGCCGTCCCCTCCACTATGTCACAGCCATGATCCCTGGGCTC
TGTATCTTGCTCCTCTCCTTGTGTTGGGTGTTCTCTGCCCTCTATGGCCTCATCCATATC
CTCCTCATGACCAGGTGACCTTCTGTGGGTCTCAAAAGATCCACTACCTCTTCTGTGAGA
TGTACTTCCTGCTAAGGCTGGCATGTTCCAACATCCACGTCAACCACACAGTACTGGTTG
CCACGGGCTGCTTCATCTTCCTCATCCCCTTAGGTTTCATGATCACATCCTACGCCCGCA
TTGTCAGAGCCATCCTCCAAATACCCTCAGCCACTGGGAAGTACAAAGCCTTCTCCACCT
GTGCTTCCCATTTGGCTGTGGTCTCCCTCTTCTATGGGACTCTGGGTATGGTGTACCTGC
AGCCCCTCCAAACCTACTCCATGAAGGACTCAGTAGCCACAGTGATGTATGCGGTGGTGA
CGCCATGATTAACCCTTTCATCTACAGCCTGAGGAACAAGGACATGCATGGGGCTCTGGG
AAGACTTCGCCAAGGAAAAGCCTTCCAGAAGTTGACATGAGGGGTAATTTTG
Conceptual translation MDGGNQSEGSEFLLLGISESPEQQQMLFWMFLVRYLVTVLGNVLIILAISSDSRLHTPMY
FFLANLSFTDLFFVTNTIPKMLVNLQSQNKAISYTGCLTQLYFLVSLVALDNLNLAVMAY
DRYVAICRPLHYVTAMIPGLCILLLSLCWVFSALYGLIHILLMT/VTFCGSQKIHYLFC
EMYFLLRLACSNIHVNHTVLVATGCFIFLIPLGFMITSYARIVRAILQIPSATGKYKAFS
TCASHLAVVSLFYGTLGMVYLQPLQTYSMKDSVATVMYAVVT/MINPFIYSLRNKDMHG
ALGRLRQGKAFQKLTXVIL

Protein domains and features

Variations - SNPs

Chr Start End Type Variation AA Change SNP IDs
17 100 -100 SNP A/G 1000GP (YRI, YRI, YRI, YRI)
17 3,168,956 3,168,956 SNP C/T rs28377218 (DbSNP)
17 3,168,958 3,168,958 SNP A/C rs28582698 (DbSNP)
17 3,168,978 3,168,978 SNP A/G rs769428 (DbSNP)
17 3,169,187 3,169,187 SNP G/A rs2459527 (DbSNP)
17 3,169,192 3,169,192 SNP C/G rs55907938 (DbSNP)
17 3,169,458 3,169,458 SNP G/A rs2062184 (DbSNP)
17 3,169,481 3,169,480 Ins(1) -/C rs34776598 (DbSNP)
17 3,265,649 3,265,649 SNP T/C 1000GP (CEU)
17 3,265,684 3,265,684 SNP A/G 1000GP (CEU, CHBJPT)
17 3,265,893 3,265,893 SNP A/G 1000GP (CEU)
17 3,265,898 3,265,898 SNP G/C 1000GP (CHBJPT)
17 3,266,164 3,266,164 SNP A/G 1000GP (CEU)
17 3,266,264 3,266,264 SNP G/A 1000GP (CEU)

Haplotypes

Protein haplotypes were calculated using the 1000 genomes project as described in Olender T. et. al. BMC Genomics 2012.